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Protein
Submitted name:

IGSF1 isoform 4

Gene

IGSF1

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
IGSF1 isoform 4Imported
Submitted name:
Immunoglobulin superfamily member 1Imported
Gene namesi
Name:IGSF1Imported
ORF Names:CK820_G0049093Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome X

Organism-specific databases

VGNCiVGNC:3759 IGSF1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei520 – 539HelicalSequence analysisAdd BLAST20
Transmembranei551 – 579HelicalSequence analysisAdd BLAST29

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_501457631329 – 1341Sequence analysisAdd BLAST1313

Proteomic databases

PaxDbiH2QZ42

Expressioni

Gene expression databases

BgeeiENSPTRG00000022273

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000038359

Structurei

3D structure databases

ProteinModelPortaliH2QZ42
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 106Ig-likeInterPro annotationAdd BLAST69
Domaini321 – 392Ig-likeInterPro annotationAdd BLAST72
Domaini419 – 484Ig-likeInterPro annotationAdd BLAST66
Domaini782 – 874Ig-likeInterPro annotationAdd BLAST93
Domaini878 – 947Ig-likeInterPro annotationAdd BLAST70
Domaini1070 – 1139Ig-likeInterPro annotationAdd BLAST70

Keywords - Domaini

Immunoglobulin domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IIFF Eukaryota
ENOG410YSQG LUCA
GeneTreeiENSGT00910000144122
InParanoidiH2QZ42
OMAiWENITLW
OrthoDBiEOG091G020P
TreeFamiTF336644

Family and domain databases

Gene3Di2.60.40.10, 12 hits
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013151 Immunoglobulin
PfamiView protein in Pfam
PF00047 ig, 1 hit
PF13895 Ig_2, 7 hits
SMARTiView protein in SMART
SM00409 IG, 11 hits
SM00408 IGc2, 9 hits
SUPFAMiSSF48726 SSF48726, 12 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 6 hits

Sequencei

Sequence statusi: Complete.

H2QZ42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLDRPGEGA TMLKTFTVLL FCIRMSLGMT SIVMDPQPEL WIESNYPQAP
60 70 80 90 100
WENITLWCRS PSRISSKFLL LKDKTQMTWI RPSHKTFQVS FLIGALTESN
110 120 130 140 150
AGLYRCCYWK ETGWSKPSKV LELEAPGQLP KPIFWIQAET PPLPGCNVNI
160 170 180 190 200
LCHGWLQDLV FMLFKEGYAE PVDYQVPTGT MAIFSIDNLT PEDEGVYICR
210 220 230 240 250
THIQMLPTLW SEPSNPLKLV VAGLYPKPTL TAHPGPIMAP GESLNLRCQG
260 270 280 290 300
PIYGMTFALM RVEDLEKSFY HKKTIKNEAN FFFQSLKIQD TGHYLCFYYD
310 320 330 340 350
ASYRGSLLSD VLKIWVTDTF PKTWLLARPS AVVQMGQNVS LRCRGPVDGV
360 370 380 390 400
GLALYKKGED KPLQFLDATS IDDNTSFFLN NVTYSDTGIY SCHYLLTWKT
410 420 430 440 450
SITMPSHNTV ELMVVDKPPK PSLSAWPSTV FKLGKAITLQ CRVSHPVLEF
460 470 480 490 500
SLEWEERETF QKFSVNGDFI ISNVDGKGTG TYSCSYRIET HPNIWSHRSE
510 520 530 540 550
PLKLMGPAGY LTWNYVLNEA IRLSLIMQLV ALLLVVLWIR WKCRRLRIRE
560 570 580 590 600
AWLLGTAQGV TMLFIVTALL CCAISFAGLC NGVLIEETEI VMPTPKPELW
610 620 630 640 650
AETNFPLAPW KNLTLWCRSP SGSTKEFVLL KDGTGWIATR PASEQVRAAF
660 670 680 690 700
PLGALTQSHT GSYHCHSWEE MAVSEPSEAL ELVGTDILPK PVISASPPIR
710 720 730 740 750
GQELQLRCKG WLAGVGFALY KEGEQEPVQQ LGAVGREAFF TIQRMEDKDE
760 770 780 790 800
GNYSCRTHTE KRPFKWSEPS EPLELVIKEM YPKPFFKTWA SPVVTPGARV
810 820 830 840 850
TFNCSTPHQH MSFILYKDGS EIASSDRSWA SPGASAAHFL IISVGIGDGG
860 870 880 890 900
NYSCRYYDFS IWSEPSDPVE LVVTEFYPKP TLLAQPGPVV FPGKSVILRC
910 920 930 940 950
QGTFQGMRFA LLQEGAHVPL QFRSVSGNSA DFLLHTVGAE DSGNYSCIYY
960 970 980 990 1000
ETTMSNRGSY LSMPLMIWVT DTFPKPWLFA EPSSVVPMGQ NVTLWCRGPV
1010 1020 1030 1040 1050
HGVGYILHKE GEATSMQLWG STSNDGAFPI TNISGASMGR YSCCYHPDWT
1060 1070 1080 1090 1100
SSIKIQPSNT LELLVTGLLP KPSLLAQPGP MVAPGENMTL QCQGELPDST
1110 1120 1130 1140 1150
FVLLKEGAQE PLEQQRPSGY RADFWMPAVR GEDSGIYSCV YYLDSAPLAA
1160 1170 1180 1190 1200
SNHSDSLEIW VTDKPPKPSL SAWPSTMFKL GKDITLQCRG PLPGVEFVLE
1210 1220 1230 1240 1250
HDGEEAPQQF SEDGDFVINN VEGKGIGNYS CSYRLQAYPD IWSEPSDPLE
1260 1270 1280 1290 1300
LVGAAGPVAQ ECTVGNIVRS SLIVVVVVAL GVVLAIEWKK WPRLRTRGSE
1310 1320 1330 1340
TDGRDQTIAL EECNQEGEPG TPANSPSSTS QRISVELPVP I
Length:1,341
Mass (Da):149,280
Last modified:February 28, 2018 - v2
Checksum:iAF01316BDF80074F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04057116 Genomic DNA No translation available.
AC193681 Genomic DNA No translation available.
NBAG03000486 Genomic DNA Translation: PNI20097.1
RefSeqiXP_016799538.1, XM_016944049.1

Genome annotation databases

EnsembliENSPTRT00000041535; ENSPTRP00000038359; ENSPTRG00000022273
GeneIDi473781

Similar proteinsi

Entry informationi

Entry nameiH2QZ42_PANTR
AccessioniPrimary (citable) accession number: H2QZ42
Secondary accession number(s): A0A2J8JBG2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 30 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health