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Protein
Submitted name:

KIAA0020

Gene

PUM3

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
KIAA0020Imported
Submitted name:
Pumilio RNA binding family member 3Imported
Gene namesi
Name:PUM3Imported
Synonyms:KIAA0020Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 9

Organism-specific databases

VGNCiVGNC:4841 PUM3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSPTRG00000020735

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000035473

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 510PUM-HDInterPro annotationAdd BLAST374
Repeati164 – 200PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati201 – 236PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati350 – 385PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati424 – 460PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati493 – 531PumilioPROSITE-ProRule annotationAdd BLAST39

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG2050 Eukaryota
ENOG410XSHY LUCA
GeneTreeiENSGT00390000015757
KOiK14844
OMAiREWYGPE
OrthoDBiEOG091G06QP
TreeFamiTF312954

Family and domain databases

Gene3Di1.25.10.10, 2 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012959 CPL_dom
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
PfamiView protein in Pfam
PF08144 CPL, 1 hit
SMARTiView protein in SMART
SM00025 Pumilio, 6 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50302 PUM, 5 hits
PS50303 PUM_HD, 1 hit

Sequencei

Sequence statusi: Complete.

H2QWZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVKGKKQFT GKSTKTAQEK NRFHKNSDSG SSKTFPTRKV AKEGGPKVTS
60 70 80 90 100
RNFEKSITKL GKKGVKQFKN KQQGDKSPKN KFQQANKFNK KRKFQPDGKS
110 120 130 140 150
DESAAKKPKW DDFKKKKKEL KQSRQLSDKT NYDIVVRAKQ IWEILRRKDC
160 170 180 190 200
DKEKRVKLMS DLQKLIQGKI KTIAFAHDST RVIQCYIQYG NEEQRKQAFE
210 220 230 240 250
ELRDDLVELS KAKYSRNIVK KFLMYGSKPQ IAEIIRSFKG HVRKMLRHAE
260 270 280 290 300
ASAIVEYAYN DKAILEQRNM LTEELYGNTF QLYKSADHPT LDKVLEVQPE
310 320 330 340 350
KLELIMDEMK QILTPMAQKE AVIKHSLVHK VFLDFFTYAP PKLRSEMIEA
360 370 380 390 400
IREAVVYLAH THDGARVAMH CLWHGTPKDR KVIVKTMKTY VEKVANGQYS
410 420 430 440 450
HLVLLAAFDC IDDTKLVKQI IISEIISSLP SIVNDKYGRK VLLYLLSPRD
460 470 480 490 500
PAHTVREIIE VLQKGDGNAH SKKDTEVRRR ELLESISPAL LSYLQEHAQE
510 520 530 540 550
VVLDKSACVL VSDILGSATG DVQPTMNAIA SLAATGLHPG GKDGELHIAE
560 570 580 590 600
HPAGHLVLKW LIEQDKKMKE NGREGCFAKT LVEHVGMKNL KSWASVNRGA
610 620 630 640
IILSSLLQSC DLEVANKVKA ALKSLIPTLE KTKSTSKGIE ILLEKLST
Length:648
Mass (Da):73,510
Last modified:March 21, 2012 - v1
Checksum:i59320D9AC471D9CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04057723 Genomic DNA No translation available.
GABC01002252 mRNA Translation: JAA09086.1
GABF01000807 mRNA Translation: JAA21338.1
GABD01005065 mRNA Translation: JAA28035.1
GABE01010672 mRNA Translation: JAA34067.1
RefSeqiXP_009454538.1, XM_009456263.2

Genome annotation databases

EnsembliENSPTRT00000038373; ENSPTRP00000035473; ENSPTRG00000020735
GeneIDi464968
KEGGiptr:464968

Similar proteinsi

Entry informationi

Entry nameiH2QWZ0_PANTR
AccessioniPrimary (citable) accession number: H2QWZ0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 25, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health