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H2QSP6

- H2QSP6_PANTR

UniProt

H2QSP6 - H2QSP6_PANTR

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Protein
Submitted name:

Sialidase 1 (Lysosomal sialidase)

Gene
NEU1
Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: Ensembl

GO - Biological processi

  1. oligosaccharide catabolic process Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase 1 (Lysosomal sialidase)Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:NEU1Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
ProteomesiUP000002277: Chromosome 6

Subcellular locationi

GO - Cellular componenti

  1. cell junction Source: Ensembl
  2. lysosome Source: Ensembl
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliH2QSP6.
SMRiH2QSP6. Positions 55-396.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00720000108878.
KOiK01186.
OMAiGTEMFAP.
OrthoDBiEOG779NXT.
TreeFamiTF331063.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

H2QSP6-1 [UniParc]FASTAAdd to Basket

« Hide

MTGERPSTAL PDRRWGPRIL GFWGGCRVWV FAAIFLLLSL AASWSKAEND    50
FGLVQPLVTM EQLLWVSGRQ IGSVDTFRIP LITATPRGTL LAFAEARKMS 100
SSDEGAKFIA LRRSMDQGST WSPTAFIVND GDVPDGLNLG AVVSDVETGV 150
VFLFYSLCAH KAGCQVASTM LVWSKDDGVS WSTPRNLSLD IGTEVFAPGP 200
GSGIQKQREP RKGRLIVCGH GTLERDGVFC LLSDDHGASW RYGSGVSGIP 250
YGQPKQENDF NPDECQPYEL PDGSVVINAR NQNNYHCHCR IVLRSYDACD 300
TLRPRDVTFD PELVDPVVAA GAVVTSSGIV FFSNPAHPEF RVNLTLRWSF 350
SNGTSWRKET VQLWPGPSGY SSLATLEGSM DGEEQAPQLY VLYEKGRNHY 400
TESISVAKIS VYGTL 415
Length:415
Mass (Da):45,467
Last modified:March 21, 2012 - v1
Checksum:i360E60A256DEA07F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03049300 Genomic DNA. No translation available.
GABC01006645 mRNA. Translation: JAA04693.1.
GABF01010554 mRNA. Translation: JAA11591.1.
GABD01005088 mRNA. Translation: JAA28012.1.
GABE01011106 mRNA. Translation: JAA33633.1.
RefSeqiXP_001160380.1. XM_001160380.1.

Genome annotation databases

EnsembliENSPTRT00000033233; ENSPTRP00000030706; ENSPTRG00000017990.
GeneIDi471968.
KEGGiptr:471968.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03049300 Genomic DNA. No translation available.
GABC01006645 mRNA. Translation: JAA04693.1 .
GABF01010554 mRNA. Translation: JAA11591.1 .
GABD01005088 mRNA. Translation: JAA28012.1 .
GABE01011106 mRNA. Translation: JAA33633.1 .
RefSeqi XP_001160380.1. XM_001160380.1.

3D structure databases

ProteinModelPortali H2QSP6.
SMRi H2QSP6. Positions 55-396.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSPTRT00000033233 ; ENSPTRP00000030706 ; ENSPTRG00000017990 .
GeneIDi 471968.
KEGGi ptr:471968.

Organism-specific databases

CTDi 4758.

Phylogenomic databases

GeneTreei ENSGT00720000108878.
KOi K01186.
OMAi GTEMFAP.
OrthoDBi EOG779NXT.
TreeFami TF331063.

Family and domain databases

Gene3Di 2.120.10.10. 1 hit.
InterProi IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
SUPFAMi SSF50939. SSF50939. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Initial sequence of the chimpanzee genome and comparison with the human genome."
    Chimpanzee sequencing and analysis consortium
    Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
  3. "De novo assembly of the reference chimpanzee transcriptome from NextGen mRNA sequences."
    Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.
    Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Adipose stromalImported, Skeletal muscleImported, SkinImported and Smooth vascularImported.

Entry informationi

Entry nameiH2QSP6_PANTR
AccessioniPrimary (citable) accession number: H2QSP6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 11, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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