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H2QSP6 (H2QSP6_PANTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein Ensembl ENSPTRP00000030706
Gene names
Name:NEU1 Ensembl ENSPTRP00000030706 EMBL JAA04693.1
OrganismPan troglodytes (Chimpanzee) [Reference proteome] Ensembl ENSPTRP00000030706
Taxonomic identifier9598 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcell junction

Inferred from electronic annotation. Source: Ensembl

lysosome

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2QSP6 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 360E60A256DEA07F

FASTA41545,467
        10         20         30         40         50         60 
MTGERPSTAL PDRRWGPRIL GFWGGCRVWV FAAIFLLLSL AASWSKAEND FGLVQPLVTM 

        70         80         90        100        110        120 
EQLLWVSGRQ IGSVDTFRIP LITATPRGTL LAFAEARKMS SSDEGAKFIA LRRSMDQGST 

       130        140        150        160        170        180 
WSPTAFIVND GDVPDGLNLG AVVSDVETGV VFLFYSLCAH KAGCQVASTM LVWSKDDGVS 

       190        200        210        220        230        240 
WSTPRNLSLD IGTEVFAPGP GSGIQKQREP RKGRLIVCGH GTLERDGVFC LLSDDHGASW 

       250        260        270        280        290        300 
RYGSGVSGIP YGQPKQENDF NPDECQPYEL PDGSVVINAR NQNNYHCHCR IVLRSYDACD 

       310        320        330        340        350        360 
TLRPRDVTFD PELVDPVVAA GAVVTSSGIV FFSNPAHPEF RVNLTLRWSF SNGTSWRKET 

       370        380        390        400        410 
VQLWPGPSGY SSLATLEGSM DGEEQAPQLY VLYEKGRNHY TESISVAKIS VYGTL 

« Hide

References

« Hide 'large scale' references
[1]"Initial sequence of the chimpanzee genome and comparison with the human genome."
Chimpanzee sequencing and analysis consortium
Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
[3]"De novo assembly of the reference chimpanzee transcriptome from NextGen mRNA sequences."
Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Adipose stromal EMBL JAA04693.1, Skeletal muscle EMBL JAA33633.1, Skin EMBL JAA28012.1 and Smooth vascular EMBL JAA11591.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACZ03049300 Genomic DNA. No translation available.
GABC01006645 mRNA. Translation: JAA04693.1.
GABF01010554 mRNA. Translation: JAA11591.1.
GABD01005088 mRNA. Translation: JAA28012.1.
GABE01011106 mRNA. Translation: JAA33633.1.
RefSeqXP_001160380.1. XM_001160380.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSPTRT00000033233; ENSPTRP00000030706; ENSPTRG00000017990.
GeneID471968.
KEGGptr:471968.

Organism-specific databases

CTD4758.

Phylogenomic databases

GeneTreeENSGT00720000108878.
KOK01186.
OMAGTEMFAP.
OrthoDBEOG779NXT.
TreeFamTF331063.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026942. Sialidase-1.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF9. PTHR10628:SF9. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2QSP6_PANTR
AccessionPrimary (citable) accession number: H2QSP6
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)