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H2QS92 (H2QS92_PANTR) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein Ensembl ENSPTRP00000030210
Gene names
Name:F13A1 EMBL JAA39992.1 Ensembl ENSPTRP00000030210
OrganismPan troglodytes (Chimpanzee) [Reference proteome] Ensembl ENSPTRP00000030210
Taxonomic identifier9598 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan

Protein attributes

Sequence length732 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3151 By similarity PIRSR PIRSR000459-1
Active site3741 By similarity PIRSR PIRSR000459-1
Active site3971 By similarity PIRSR PIRSR000459-1
Metal binding4371Calcium By similarity PIRSR PIRSR000459-2
Metal binding4391Calcium By similarity PIRSR PIRSR000459-2
Metal binding4861Calcium By similarity PIRSR PIRSR000459-2
Metal binding4911Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
H2QS92 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: B2CBF4AFF850A54A

FASTA73283,291
        10         20         30         40         50         60 
MSETSRTAFG GRRAVPPNNS NAAEDDLPTV ELQGVVPRGV NLQEFLNVTS VHLFKERWDT 

        70         80         90        100        110        120 
NKVDHHTDKY ENNKLIVRRG QSFYVQIDFN RPYDPRRDLF RVEYVIGRYP QENKGTYIPV 

       130        140        150        160        170        180 
PIVSELQSGK WGAKIVMRED RSVRLSIQSS PKCIVGKFRM YVAVWTPYGV LRTSRNPETD 

       190        200        210        220        230        240 
TYILFNPWCE DDAVYLDNEK EREEYVLNDI GVIFYGEVND IKTRSWSYGQ FEDGILDTCL 

       250        260        270        280        290        300 
YVMDRAQMDL SGRGNPIKVS RVGSAMVNAK DDEGVLVGSW DNIYAYGVPP SAWTGSVDIL 

       310        320        330        340        350        360 
LEYRSSENPV RYGQCWVFAG VFNTFLRCLG IPARIVTNYF SAHDNDANLQ MDIFLEEDGN 

       370        380        390        400        410        420 
VNSKLTKDSV WNYHCWNEAW MTRPDLPVGF GGWQAVDSTP QENSDGMYRC GPASVQAIKH 

       430        440        450        460        470        480 
GHVCFQFDAP FVFAEVNSDL IYITAKKDGT HVVENVDATH IGKLIVTKQI GGDGMMDITD 

       490        500        510        520        530        540 
TYKFQEGQEE ERLALETALM YGAKKPLNTE GVVKSRSNVD MDFEVENAVL GKDFKLSITF 

       550        560        570        580        590        600 
RNNSHNRYTI TAYLSANITF YTGVPKAEFK KETFDVTLEP LSFKKEAVLI QAGEYMGQLL 

       610        620        630        640        650        660 
EQASLHFFVT ARINETRDVL AKQKSTVLTI PEIIIKVRGT QVVGSDMTVT VEFTNPLKET 

       670        680        690        700        710        720 
LRNVWIHLDG PGITRPMKKM FREIRPNSTV QWEEVCRPWV SGHRKLIASM SSDSLRHVYG 

       730 
ELDVQIQRRP SM 

« Hide

References

« Hide 'large scale' references
[1]"Initial sequence of the chimpanzee genome and comparison with the human genome."
Chimpanzee sequencing and analysis consortium
Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
[3]"De novo assembly of the reference chimpanzee transcriptome from NextGen mRNA sequences."
Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Skeletal muscle EMBL JAA39992.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACZ03047284 Genomic DNA. No translation available.
AACZ03047285 Genomic DNA. No translation available.
AACZ03047286 Genomic DNA. No translation available.
AACZ03047287 Genomic DNA. No translation available.
AACZ03047288 Genomic DNA. No translation available.
AACZ03047289 Genomic DNA. No translation available.
AACZ03047290 Genomic DNA. No translation available.
AACZ03047291 Genomic DNA. No translation available.
AACZ03047292 Genomic DNA. No translation available.
GABE01004747 mRNA. Translation: JAA39992.1.
RefSeqXP_518220.3. XM_518220.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSPTRT00000032699; ENSPTRP00000030210; ENSPTRG00000017694.
GeneID462413.
KEGGptr:462413.

Organism-specific databases

CTD2162.

Phylogenomic databases

GeneTreeENSGT00740000115156.
KOK03917.
OMACEEDAVY.
OrthoDBEOG7WT40M.
TreeFamTF324278.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2QS92_PANTR
AccessionPrimary (citable) accession number: H2QS92
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: February 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)