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H2QJQ3 (H2QJQ3_PANTR) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1084 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionHydrolase SAAS SAAS023801
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchromatin remodeling

Inferred from electronic annotation. Source: Ensembl

histone H3 deacetylation

Inferred from electronic annotation. Source: Ensembl

histone H4 deacetylation

Inferred from electronic annotation. Source: Ensembl

negative regulation of cell proliferation

Inferred from electronic annotation. Source: Ensembl

negative regulation of glycolysis

Inferred from electronic annotation. Source: Ensembl

negative regulation of myotube differentiation

Inferred from electronic annotation. Source: Ensembl

negative regulation of osteoblast differentiation

Inferred from electronic annotation. Source: Ensembl

negative regulation of sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: Ensembl

negative regulation of transcription from RNA polymerase II promoter

Inferred from electronic annotation. Source: Ensembl

osteoblast development

Inferred from electronic annotation. Source: Ensembl

peptidyl-lysine deacetylation

Inferred from electronic annotation. Source: Ensembl

positive regulation of cell proliferation

Inferred from electronic annotation. Source: Ensembl

positive regulation of protein sumoylation

Inferred from electronic annotation. Source: Ensembl

positive regulation of sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: Ensembl

positive regulation of transcription from RNA polymerase II promoter

Inferred from electronic annotation. Source: Ensembl

regulation of cardiac muscle contraction by calcium ion signaling

Inferred from electronic annotation. Source: Ensembl

regulation of protein binding

Inferred from electronic annotation. Source: Ensembl

regulation of skeletal muscle fiber development

Inferred from electronic annotation. Source: Ensembl

response to denervation involved in regulation of muscle adaptation

Inferred from electronic annotation. Source: Ensembl

response to interleukin-1

Inferred from electronic annotation. Source: Ensembl

skeletal system development

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentactomyosin

Inferred from electronic annotation. Source: Ensembl

cytosol

Inferred from electronic annotation. Source: Ensembl

histone deacetylase complex

Inferred from electronic annotation. Source: Ensembl

neuromuscular junction

Inferred from electronic annotation. Source: Ensembl

transcriptional repressor complex

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionhistone deacetylase activity

Inferred from electronic annotation. Source: Ensembl

potassium ion binding

Inferred from electronic annotation. Source: Ensembl

sequence-specific DNA binding

Inferred from electronic annotation. Source: Ensembl

transcription corepressor activity

Inferred from electronic annotation. Source: Ensembl

transcription regulatory region DNA binding

Inferred from electronic annotation. Source: Ensembl

zinc ion binding

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2QJQ3 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 098128158A8822EF

FASTA1,084118,964
        10         20         30         40         50         60 
MSSQSHPDGL SGRDQPVELL NPARVNHMPS TVDVAAALPL QVAPSAVPMD LRLDHQFSLP 

        70         80         90        100        110        120 
VAEPALREQQ LQQELLALKQ KQQIQRQILI AEFQRQHEQL SRQHEAQLHE HIKQQQEMLA 

       130        140        150        160        170        180 
MKHQQELLEH QRKLERHRQE QELEKQHREQ KLQQLKNKEK GKESAVASTE VKMKLQEFVL 

       190        200        210        220        230        240 
NKKKALAHRN LNHCISSDPR YWYGKTQHSS LDQSSPPQSG VSTSYNHPVL GMYDAKDDFP 

       250        260        270        280        290        300 
LRKTASEPNL KLRSRLKQKV AERRSSPLLR RKDGPVVTAL KKRPLDVTDS ACSSAPGSGP 

       310        320        330        340        350        360 
SSPNNSSGSV SAENGIAPTV PSIPAETSLA HRLVAREGSA APLPLYTSPS LPNITLGLPA 

       370        380        390        400        410        420 
TGPSAGTAGQ QDAERLALPA LQQRLSLFPG THLTPYLSTS PLERDGGAAH SPLLQHMVLL 

       430        440        450        460        470        480 
EQPPAQAPLV TGLGALPLHA QSLVGADRVS PSIHKLRQHR PLGRTQSAPL PQNAQALQHL 

       490        500        510        520        530        540 
VIQQQHQQFL EKHKQQFQQQ QLQMNKIIPK PSEPARQPES HPEETEEELR EHQALLDEPY 

       550        560        570        580        590        600 
LDRLPGQKEA HAQAGVQVKQ EPIESDDEEA EPPREVEPGQ RQPSEQELLF RQQALLLEQQ 

       610        620        630        640        650        660 
RIHQLRNYQA SMEAAGIPVS FGGHRPLSRA QSSPASATFP VSVQEPPTKP RFTTGLVYDT 

       670        680        690        700        710        720 
LMLKHQCTCG SSSSHPEHAG RIQSIWSRLQ ETGLRGKCEC IRGRKATLEE LQTVHSEAHT 

       730        740        750        760        770        780 
LLYGTNPLNR QKLDSKKLLG SLASVFVRLP CGGVGVDSDT IWNEVHSAGA ARLAVGCVVE 

       790        800        810        820        830        840 
LVFKVATGEL KNGFAVVRPP GHHAEESTPM GFCYFNSVAV AAKLLQQRLS VSKILIVDWD 

       850        860        870        880        890        900 
VHHGNGTQQA FYSDPSVLYV SLHRYDDGNF FPGSGAPDEV GTGPGVGFNV NMAFTGGLDP 

       910        920        930        940        950        960 
PMGDAEYLAA FRTVVMPIAS EFAPDVVLVS SGFDAVEGHP TPLGGYNLSA RCFGYLTKQL 

       970        980        990       1000       1010       1020 
MGLAGGRIVL ALEGGHDLTA ICDASEACVS ALLGNELDPL PEKVLQQRPN ANAVRSMEKV 

      1030       1040       1050       1060       1070       1080 
MEIHSKYWRC LQRTTSTAGR SLIEAQTCEN EEAETVTAMA SLSVGVKPAE KRPDEEPMEE 


EPPL 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence of the chimpanzee Y chromosome."
Hughes J.F., Pyntikova T., Skaletsky H., Minx P.J., Rozen S., Wilson R.K., Page D.C.
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Initial sequence of the chimpanzee genome and comparison with the human genome."
Chimpanzee sequencing and analysis consortium
Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
[4]"De novo assembly of the reference chimpanzee transcriptome from NextGen mRNA sequences."
Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Adipose stromal EMBL JAA02580.1, Skeletal muscle EMBL JAA43254.1, Skin EMBL JAA24704.1 and Smooth vascular EMBL JAA15842.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACZ03021132 Genomic DNA. No translation available.
AACZ03021133 Genomic DNA. No translation available.
AACZ03021134 Genomic DNA. No translation available.
AACZ03021135 Genomic DNA. No translation available.
AACZ03021136 Genomic DNA. No translation available.
AACZ03021137 Genomic DNA. No translation available.
AACZ03021138 Genomic DNA. No translation available.
AACZ03021139 Genomic DNA. No translation available.
AACZ03021140 Genomic DNA. No translation available.
AACZ03021141 Genomic DNA. No translation available.
AACZ03021142 Genomic DNA. No translation available.
AACZ03021143 Genomic DNA. No translation available.
AACZ03021144 Genomic DNA. No translation available.
AACZ03021145 Genomic DNA. No translation available.
AACZ03021146 Genomic DNA. No translation available.
AACZ03021147 Genomic DNA. No translation available.
AACZ03021148 Genomic DNA. No translation available.
AACZ03021149 Genomic DNA. No translation available.
AACZ03021150 Genomic DNA. No translation available.
AACZ03021151 Genomic DNA. No translation available.
AACZ03021152 Genomic DNA. No translation available.
AACZ03021153 Genomic DNA. No translation available.
AACZ03021154 Genomic DNA. No translation available.
AACZ03021155 Genomic DNA. No translation available.
GABC01008758 mRNA. Translation: JAA02580.1.
GABF01006303 mRNA. Translation: JAA15842.1.
GABD01008396 mRNA. Translation: JAA24704.1.
GABE01001485 mRNA. Translation: JAA43254.1.
RefSeqXP_003309602.1. XM_003309554.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSPTRT00000024291; ENSPTRP00000022412; ENSPTRG00000013097.
GeneID460060.
KEGGptr:460060.

Organism-specific databases

CTD9759.

Phylogenomic databases

GeneTreeENSGT00530000062809.
KOK11406.
OMAVSFGGHR.
OrthoDBEOG7RFTH5.
TreeFamTF106174.

Family and domain databases

Gene3D3.40.800.20. 1 hit.
InterProIPR019154. Arb2_domain.
IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
IPR024643. Hist_deacetylase_Gln_rich_N.
IPR017320. Histone_deAcase_II_euk.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF09757. Arb2. 1 hit.
PF12203. HDAC4_Gln. 1 hit.
PF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFPIRSF037911. HDAC_II_euk. 1 hit.
PRINTSPR01270. HDASUPER.
ProtoNetSearch...

Entry information

Entry nameH2QJQ3_PANTR
AccessionPrimary (citable) accession number: H2QJQ3
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: February 19, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)