H2QJQ3 (H2QJQ3_PANTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Histone deacetylase 4 EMBL JAA02580.1

Submitted name:
Uncharacterized protein Ensembl ENSPTRP00000022412

Gene names

Name:	ENSG00000068024 Ensembl ENSPTRP00000022412
Synonyms:	HDAC4 EMBL JAA02580.1

Organism

Pan troglodytes (Chimpanzee) [Reference proteome] Ensembl ENSPTRP00000022412

Taxonomic identifier

9598 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Pan

Protein attributes

Sequence length	1084 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Hydrolase SAAS SAAS000286
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	histone deacetylation Inferred from electronic annotation. Source: GOC
Cellular_component	histone deacetylase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	histone deacetylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2QJQ3 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 098128158A8822EF	FASTA	1,084	118,964
	10 20 30 40 50 60 MSSQSHPDGL SGRDQPVELL NPARVNHMPS TVDVAAALPL QVAPSAVPMD LRLDHQFSLP 70 80 90 100 110 120 VAEPALREQQ LQQELLALKQ KQQIQRQILI AEFQRQHEQL SRQHEAQLHE HIKQQQEMLA 130 140 150 160 170 180 MKHQQELLEH QRKLERHRQE QELEKQHREQ KLQQLKNKEK GKESAVASTE VKMKLQEFVL 190 200 210 220 230 240 NKKKALAHRN LNHCISSDPR YWYGKTQHSS LDQSSPPQSG VSTSYNHPVL GMYDAKDDFP 250 260 270 280 290 300 LRKTASEPNL KLRSRLKQKV AERRSSPLLR RKDGPVVTAL KKRPLDVTDS ACSSAPGSGP 310 320 330 340 350 360 SSPNNSSGSV SAENGIAPTV PSIPAETSLA HRLVAREGSA APLPLYTSPS LPNITLGLPA 370 380 390 400 410 420 TGPSAGTAGQ QDAERLALPA LQQRLSLFPG THLTPYLSTS PLERDGGAAH SPLLQHMVLL 430 440 450 460 470 480 EQPPAQAPLV TGLGALPLHA QSLVGADRVS PSIHKLRQHR PLGRTQSAPL PQNAQALQHL 490 500 510 520 530 540 VIQQQHQQFL EKHKQQFQQQ QLQMNKIIPK PSEPARQPES HPEETEEELR EHQALLDEPY 550 560 570 580 590 600 LDRLPGQKEA HAQAGVQVKQ EPIESDDEEA EPPREVEPGQ RQPSEQELLF RQQALLLEQQ 610 620 630 640 650 660 RIHQLRNYQA SMEAAGIPVS FGGHRPLSRA QSSPASATFP VSVQEPPTKP RFTTGLVYDT 670 680 690 700 710 720 LMLKHQCTCG SSSSHPEHAG RIQSIWSRLQ ETGLRGKCEC IRGRKATLEE LQTVHSEAHT 730 740 750 760 770 780 LLYGTNPLNR QKLDSKKLLG SLASVFVRLP CGGVGVDSDT IWNEVHSAGA ARLAVGCVVE 790 800 810 820 830 840 LVFKVATGEL KNGFAVVRPP GHHAEESTPM GFCYFNSVAV AAKLLQQRLS VSKILIVDWD 850 860 870 880 890 900 VHHGNGTQQA FYSDPSVLYV SLHRYDDGNF FPGSGAPDEV GTGPGVGFNV NMAFTGGLDP 910 920 930 940 950 960 PMGDAEYLAA FRTVVMPIAS EFAPDVVLVS SGFDAVEGHP TPLGGYNLSA RCFGYLTKQL 970 980 990 1000 1010 1020 MGLAGGRIVL ALEGGHDLTA ICDASEACVS ALLGNELDPL PEKVLQQRPN ANAVRSMEKV 1030 1040 1050 1060 1070 1080 MEIHSKYWRC LQRTTSTAGR SLIEAQTCEN EEAETVTAMA SLSVGVKPAE KRPDEEPMEE EPPL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The DNA sequence of the chimpanzee Y chromosome." Hughes J.F., Pyntikova T., Skaletsky H., Minx P.J., Rozen S., Wilson R.K., Page D.C. Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"Initial sequence of the chimpanzee genome and comparison with the human genome." Chimpanzee sequencing and analysis consortium Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION.
[4]	"De novo assembly of the reference chimpanzee transcriptome from NextGen mRNA sequences." Maudhoo M.D., Meehan D.T., Norgren R.B.Jr. Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Adipose stromal EMBL JAA02580.1, Skeletal muscle EMBL JAA43254.1, Skin EMBL JAA24704.1 and Smooth vascular EMBL JAA15842.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AACZ03021132 Genomic DNA. No translation available. AACZ03021133 Genomic DNA. No translation available. AACZ03021134 Genomic DNA. No translation available. AACZ03021135 Genomic DNA. No translation available. AACZ03021136 Genomic DNA. No translation available. AACZ03021137 Genomic DNA. No translation available. AACZ03021138 Genomic DNA. No translation available. AACZ03021139 Genomic DNA. No translation available. AACZ03021140 Genomic DNA. No translation available. AACZ03021141 Genomic DNA. No translation available. AACZ03021142 Genomic DNA. No translation available. AACZ03021143 Genomic DNA. No translation available. AACZ03021144 Genomic DNA. No translation available. AACZ03021145 Genomic DNA. No translation available. AACZ03021146 Genomic DNA. No translation available. AACZ03021147 Genomic DNA. No translation available. AACZ03021148 Genomic DNA. No translation available. AACZ03021149 Genomic DNA. No translation available. AACZ03021150 Genomic DNA. No translation available. AACZ03021151 Genomic DNA. No translation available. AACZ03021152 Genomic DNA. No translation available. AACZ03021153 Genomic DNA. No translation available. AACZ03021154 Genomic DNA. No translation available. AACZ03021155 Genomic DNA. No translation available. GABC01008758 mRNA. Translation: JAA02580.1. GABF01006303 mRNA. Translation: JAA15842.1. GABD01008396 mRNA. Translation: JAA24704.1. GABE01001485 mRNA. Translation: JAA43254.1.
RefSeq	XP_003309602.1. XM_003309554.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSPTRT00000024291; ENSPTRP00000022412; ENSPTRG00000013097.
GeneID	460060.
KEGG	ptr:460060.
Organism-specific databases
CTD	9759.
Phylogenomic databases
GeneTree	ENSGT00530000062809.
KO	K11406.
OMA	VSFGGHR.
Family and domain databases
Gene3D	3.40.800.20. 1 hit.
InterPro	IPR019154. Arb2_domain. IPR000286. His_deacetylse. IPR023801. His_deacetylse_dom. IPR024643. Hist_deacetylase_Gln_rich_N. IPR017320. Histone_deAcase_II_euk. [Graphical view]
PANTHER	PTHR10625. PTHR10625. 1 hit.
Pfam	PF09757. Arb2. 1 hit. PF12203. HDAC4_Gln. 1 hit. PF00850. Hist_deacetyl. 1 hit. [Graphical view]
PIRSF	PIRSF037911. HDAC_II_euk. 1 hit.
PRINTS	PR01270. HDASUPER.
ProtoNet	Search...

Entry information

Entry name

H2QJQ3_PANTR

Accession

Primary (citable) accession number: H2QJQ3

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	March 6, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)