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Protein
Submitted name:

Peripherin

Gene

PRPH

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
PeripherinImported
Gene namesi
Name:PRPHImported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 12

Organism-specific databases

VGNCiVGNC:5548 PRPH

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiH2Q5V1

Expressioni

Gene expression databases

BgeeiENSPTRG00000004903

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000008377

Structurei

3D structure databases

ProteinModelPortaliH2Q5V1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini103 – 413IF rodInterPro annotationAdd BLAST311

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili93 – 141Sequence analysisAdd BLAST49
Coiled coili147 – 255Sequence analysisAdd BLAST109
Coiled coili300 – 352Sequence analysisAdd BLAST53
Coiled coili357 – 391Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IE39 Eukaryota
ENOG410YCMG LUCA
GeneTreeiENSGT00910000143989
InParanoidiH2Q5V1
OMAiYDKVDFT
OrthoDBiEOG091G12MK
TreeFamiTF330122

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR006821 Intermed_filament_DNA-bd
IPR002957 Keratin_I
IPR027700 PRPH/Plasticin
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF29 PTHR23239:SF29, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
PF04732 Filament_head, 1 hit
PRINTSiPR01248 TYPE1KERATIN
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequencei

Sequence statusi: Complete.

H2Q5V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
CPSSAAMSHH PSGLRAGFSS TSYRRTFGPP PSLSPGAFSY SSSSRFSSSR
60 70 80 90 100
LLGSASPSSS VRLGSFRSPR AGAGALLRLP SERLDFSMAE ALNQEFLATR
110 120 130 140 150
SNEKQELQEL NDRFANFIEK VRFLEQQNAA LRGELSQARG QEPARADQLC
160 170 180 190 200
QQELRELRRE LELLGRERDR VQVERDGLAE DLAALKQRLE EETRKREDAE
210 220 230 240 250
HNLVLFRKDV DDATLSRLEL ERKIESLMDE IEFLKKLHEE ELRDLQVSVE
260 270 280 290 300
SQQVQQVEVE ATVKPELTAA LRDIRAQYES IAAKNLQEAE EWYKSKYADL
310 320 330 340 350
SDAANRNHEA LRQAKQEMNE SRRQIQSLTC EVDGLRGTNE ALLRQLRELE
360 370 380 390 400
EQFALEAGGY QAGAARLEEE LRQLKEEMAR HLREYQELLN VKMALDIEIA
410 420 430 440 450
TYRKLLEGEE SRISVPVHSF ASLNIKTTVP EVEPPQDSHS RKTVLIKTIE
460 470
TRNGEVVTES QKEQRSELDK SSAHSY
Length:476
Mass (Da):54,167
Last modified:February 28, 2018 - v2
Checksum:iF6FCEE28FC7A6341
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04012897 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSPTRT00000009067; ENSPTRP00000008377; ENSPTRG00000004903

Similar proteinsi

Entry informationi

Entry nameiH2Q5V1_PANTR
AccessioniPrimary (citable) accession number: H2Q5V1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: June 20, 2018
This is version 46 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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