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H2Q0I2 (H2Q0I2_PANTR) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length382 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Sequence similarities

Contains 1 homeobox DNA-binding domain. SAAS SAAS001781

Contains 2 LIM zinc-binding domains. SAAS SAAS001781 RuleBase RU000350

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSPTRP00000002699

Sequences

Sequence LengthMass (Da)Tools
H2Q0I2 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 55424762757FF5FD

FASTA38242,747
        10         20         30         40         50         60 
MLDGLKMEEN FQSAIDTSAS FSSLLGRAVS PKSVCEGCQR VILDRFLLRL NDSFWHEQCV 

        70         80         90        100        110        120 
QCASCKEPLE TTCFYRDKKL YCKYDYEKLF AVKCGGCFEA IAPNEFVMRA QKSVYHLSCF 

       130        140        150        160        170        180 
CCCVCERQLQ KGDEFVLKEG QLLCKGDYEK ERELLSLVSP AASDSGKSDD EESLCKSAHG 

       190        200        210        220        230        240 
AGKGTAEEGK DHKRPKRPRT ILTTQQRRAF KASFEVSSKP CRKVRETLAA ETGLSVRVVQ 

       250        260        270        280        290        300 
VWFQNQRAKM KKLARRQQQQ QQDQQNTQRL SSAQTNGGGS AGMEGIMNPY TALPTPQQLL 

       310        320        330        340        350        360 
AIEQSVYSSD PFRQGLTPPQ MPGDHMHPYG AEPLFHDLDS DDTSLSNLGD CFLATSEAGP 

       370        380 
LQSRVGNPID HLYSMQNSYF TS 

« Hide

References

« Hide 'large scale' references
[1]"Initial sequence of the chimpanzee genome and comparison with the human genome."
Chimpanzee sequencing and analysis consortium
Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACZ03003763 Genomic DNA. No translation available.
AACZ03003764 Genomic DNA. No translation available.
AACZ03003765 Genomic DNA. No translation available.
AACZ03003766 Genomic DNA. No translation available.
AACZ03003767 Genomic DNA. No translation available.
RefSeqXP_001174539.1. XM_001174539.1.
XP_001174542.1. XM_001174542.2.

3D structure databases

ProteinModelPortalH2Q0I2.
ModBaseSearch...

Proteomic databases

PRIDEH2Q0I2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSPTRT00000002939; ENSPTRP00000002699; ENSPTRG00000001612.
GeneID747979.
KEGGptr:747979.

Organism-specific databases

CTD4009.

Phylogenomic databases

GeneTreeENSGT00700000104050.
KOK09371.
OMAGNAGMEG.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
2.10.110.10. 2 hits.
InterProIPR017970. Homeobox_CS.
IPR001356. Homeodomain.
IPR009057. Homeodomain-like.
IPR001781. Znf_LIM.
[Graphical view]
PfamPF00046. Homeobox. 1 hit.
PF00412. LIM. 2 hits.
[Graphical view]
SMARTSM00389. HOX. 1 hit.
SM00132. LIM. 2 hits.
[Graphical view]
SUPFAMSSF46689. Homeodomain_like. 1 hit.
PROSITEPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00478. LIM_DOMAIN_1. 2 hits.
PS50023. LIM_DOMAIN_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2Q0I2_PANTR
AccessionPrimary (citable) accession number: H2Q0I2
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)