Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Endogenous retrovirus group MER34 member 1, envelope

Gene

ERVMER34-1

Organism
Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Endogenous retrovirus group MER34 member 1, envelopeImported
Gene namesi
Name:ERVMER34-1Imported
OrganismiPongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)Imported
Taxonomic identifieri9601 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePongo
Proteomesi
  • UP000001595 Componenti: Chromosome 4

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei490 – 509HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500356708525 – 563Sequence analysisAdd BLAST539

Interactioni

Protein-protein interaction databases

STRINGi9601.ENSPPYP00000016504.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili451 – 471Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J8IS. Eukaryota.
ENOG4111C12. LUCA.
GeneTreeiENSGT00870000136875.
InParanoidiH2PDF5.
OMAiGKWRCAD.
OrthoDBiEOG091G03PH.
TreeFamiTF344098.

Family and domain databases

InterProiView protein in InterPro
IPR018154. TLV/ENV_coat_polyprotein.
PANTHERiPTHR10424. PTHR10424. 1 hit.
PfamiView protein in Pfam
PF00429. TLV_coat. 1 hit.

Sequencei

Sequence statusi: Complete.

H2PDF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSLSNYALL QLTFTAFLTI LVQPQHLLAP VFRTLSILTN QSNCWLCEHL
60 70 80 90 100
DNAEQPELVF VPSSASTWWT YSGQWMYERV WYPQAEVPNP STSSYGKVTR
110 120 130 140 150
HWEASMEAQG LSFAQVRLLE GNFSLCVENK NGTGPFLGNI PKQYCNQILW
160 170 180 190 200
FDSTDGTFMP SIDVTNESRN DYDDTSVCLG TRQCSWFAGC TNRTWNSSAV
210 220 230 240 250
PLIGLPNTQD YKWVDRNSGL TWSGNDTCLY SCQNQTKGLL YQLFRNLFCS
260 270 280 290 300
YGLTEAHGKW RCADANITND KGHDGHQTPT WWLTGSNLTL SVNNSGLFFL
310 320 330 340 350
CGNGVYKGFP PKWSGRCGLG YLVPSLTRYL TLNASQITNL RSFIHKVTPH
360 370 380 390 400
RCTQRDTDDP PLYCNPKDNS TIRALFPSLG TYDLEKAILN ISKAMEQEFS
410 420 430 440 450
ATKQTLEAHQ SKVSSLASAS QKDHVLDIPT TQRQTACGTV GKQCCLYINY
460 470 480 490 500
SEEIKSNIQR LHEASENLKN IPLLDWEGIF AKVGDWFRSW GYVLLIVLFC
510 520 530 540 550
LFIFVLIYVR VFRKSRRSLN SQPLNPALSP QQSAQLLVSE TSCQVSNRAM
560
KGLTTHQYDT SLL
Length:563
Mass (Da):63,529
Last modified:March 21, 2012 - v1
Checksum:i9F7D42410D696CEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABGA01029701 Genomic DNA. No translation available.
RefSeqiXP_002814838.1. XM_002814792.2.

Genome annotation databases

EnsembliENSPPYT00000017178; ENSPPYP00000016504; ENSPPYG00000014776.
GeneIDi100434108.
KEGGipon:100434108.

Similar proteinsi

Entry informationi

Entry nameiH2PDF5_PONAB
AccessioniPrimary (citable) accession number: H2PDF5
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: December 20, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported