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Protein
Submitted name:

PHD finger protein 21A

Gene

PHF21A

Organism
Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AImported
Gene namesi
Name:PHF21AImported
OrganismiPongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)Imported
Taxonomic identifieri9601 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePongo
Proteomesi
  • UP000001595 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9601.ENSPPYP00000003818.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini489 – 536PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 57Sequence analysisAdd BLAST28
Coiled coili563 – 601Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IREA. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiH2NDL4.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H2NDL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK
60 70 80 90 100
QKRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ
110 120 130 140 150
YHHHHAQQSA AASPNLTASQ KTVTTASMIT TKTLPLVLKA ATATMPASVV
160 170 180 190 200
GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN
210 220 230 240 250
TVTLQVQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA
260 270 280 290 300
PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP
310 320 330 340 350
MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTVKSHTET DEKQTESRTI
360 370 380 390 400
TPPAAPKPKR EENPQKLAFM VSLGLVTHDH LEEIQSKRQE RKRRTTANPV
410 420 430 440 450
YSGAVFEPER KKSAVTYLNS TMHPGTRKRG RPPKYNAVLG FGALTPTSPQ
460 470 480 490 500
SSHPDSPENE KTETTFTFPA PVQPVSLPSP TSTDGDIHED FCSVCRKSGQ
510 520 530 540 550
LLMCDTCSRV YHLDCLDPPL KTIPKGMWIC PRCQDQMLKK EEAIPWPGTL
560 570 580 590 600
AIVHSYIAYK AAKEEEKQKL LKWSSDLKQE REQLEQKVKQ LSNSISKCME
610 620 630 640 650
MKNTILARQK EMHSSLEKVK QLIRLIHGID LSKPVDSEAT VGAISNGPDC
660 670 680
TPPANAATST PAPSPSSQSC TVNCNQGEET K
Length:681
Mass (Da):75,010
Last modified:January 9, 2013 - v2
Checksum:iF94F4E7A1D3C0FEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABGA01131107 Genomic DNA. No translation available.
ABGA01131108 Genomic DNA. No translation available.
ABGA01131109 Genomic DNA. No translation available.
ABGA01131110 Genomic DNA. No translation available.
ABGA01131111 Genomic DNA. No translation available.
ABGA01131112 Genomic DNA. No translation available.
ABGA01131113 Genomic DNA. No translation available.
ABGA01131114 Genomic DNA. No translation available.
ABGA01131115 Genomic DNA. No translation available.
ABGA01131116 Genomic DNA. No translation available.
RefSeqiXP_009244691.1. XM_009246416.1.
XP_009244692.1. XM_009246417.1.

Genome annotation databases

EnsembliENSPPYT00000003965; ENSPPYP00000003818; ENSPPYG00000003325.
GeneIDi100457124.
KEGGipon:100457124.

Similar proteinsi

Entry informationi

Entry nameiH2NDL4_PONAB
AccessioniPrimary (citable) accession number: H2NDL4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: January 9, 2013
Last modified: August 30, 2017
This is version 38 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported