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Protein
Submitted name:

Uncharacterized protein

Gene

LOC101154889

Organism
Oryzias latipes (Medaka fish) (Japanese ricefish)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC101154889Imported
OrganismiOryzias latipes (Medaka fish) (Japanese ricefish)Imported
Taxonomic identifieri8090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeBeloniformesAdrianichthyidaeOryziinaeOryzias
ProteomesiUP000001038: Chromosome 14

Subcellular locationi

GO - Cellular componenti

  1. cullin-RING ubiquitin ligase complex Source: InterPro
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Belongs to the cullin family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00760000119212.
OMAiILAECAG.
OrthoDBiEOG78D7JD.
TreeFamiTF105874.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016157. Cullin_CS.
IPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS01256. CULLIN_1. 1 hit.
PS50069. CULLIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2MJ90-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATPHLLKNK GSLQFEDKWD LMRPIVLKLL RQECVTKQQW FDLFSDVHSV
60 70 80 90 100
CLWDDKGPAK IHQALKEDIL DFIKQAQARV LSHQDDTALL KAYIAEWRKF
110 120 130 140 150
FTQCDILPKP FCQLEITLMG KQGTNKKSSV EDSIVRKLML DTWNESIFSN
160 170 180 190 200
IKNRLQDSAM KLVHAERLGE AFDSQLVIGV RESYVNLCSN PEDKLQIYRD
210 220 230 240 250
NFEKAYMDST ERFYRTQAPS YLHQNGVQNY MKYVSICEKW SCRSCYAFCI
260 270 280 290 300
NSVSRLMECC VNALVTSFKE TILAECPGMI KRNETDKLHL MFSLMDKVPS
310 320 330 340 350
GMEPMLKDLE EHIMSAGLAD MVASAETITS DSEKYVEQLL TLFNRFSRLV
360 370 380 390 400
KEAFQDDPRF LTARDKAYKA VVNDATIFKL ELPVKQKGAG LKTQPESKCP
410 420 430 440 450
ELLANYCDML LRKTPLSKKL TSDEIEAKLK EVLLVLKYVQ NKDVFMRYHK
460 470 480 490 500
AHLTRRLILD ISADSEIEEN MVEWLREVGM PADYVNKLAR MFQDIKVSED
510 520 530 540 550
LNQSFKEMHK HKRLALPADS VNIKILNAGA WSRSSEKVFV SLPTELEDLI
560 570 580 590 600
PEVEDFYKKN HSGRKLHWHH LMSNGIITFK NEVGHYDLEV TTFQLAVLFA
610 620 630 640 650
WNQRPRERIS FENLKLATEL PDAELRRTLW SLVAFPKLKR QVLLYEPAVS
660 670 680 690 700
SPKDFAEGTL FCVNQEFSLI KNSKVQKRGK INLIGRLQLT TERMREEENE
710 720 730 740 750
GIVQLRILRT QEAIIQIMKM RKRINNAQLQ TELVEILKNM FLPQKKMIKE
760 770
QIEWLIDHKY IKRDETDINT FIYMA
Length:775
Mass (Da):90,279
Last modified:March 21, 2012 - v1
Checksum:i8C2E70EF28BC8F3D
GO

Genome annotation databases

EnsembliENSORLT00000018731; ENSORLP00000018730; ENSORLG00000014938.

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSORLT00000018731; ENSORLP00000018730; ENSORLG00000014938.

Phylogenomic databases

GeneTreeiENSGT00760000119212.
OMAiILAECAG.
OrthoDBiEOG78D7JD.
TreeFamiTF105874.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR016157. Cullin_CS.
IPR016158. Cullin_homology.
IPR001373. Cullin_N.
IPR019559. Cullin_neddylation_domain.
IPR016159. Cullin_repeat-like_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00888. Cullin. 1 hit.
PF10557. Cullin_Nedd8. 1 hit.
[Graphical view]
SMARTiSM00182. CULLIN. 1 hit.
SM00884. Cullin_Nedd8. 1 hit.
[Graphical view]
SUPFAMiSSF74788. SSF74788. 1 hit.
SSF75632. SSF75632. 1 hit.
PROSITEiPS01256. CULLIN_1. 1 hit.
PS50069. CULLIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Hd-rRImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Hd-rRImported.

Entry informationi

Entry nameiH2MJ90_ORYLA
AccessioniPrimary (citable) accession number: H2MJ90
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: January 7, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.