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Protein
Submitted name:

Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1

Gene

rack1

Organism
Oryzias latipes (Japanese rice fish) (Japanese killifish)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1Imported
Gene namesi
Name:rack1Imported
OrganismiOryzias latipes (Japanese rice fish) (Japanese killifish)Imported
Taxonomic identifieri8090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeBeloniformesAdrianichthyidaeOryziinaeOryzias
Proteomesi
  • UP000001038 Componenti: Chromosome 10

Subcellular locationi

Interactioni

Protein-protein interaction databases

STRINGi8090.ENSORLP00000006651.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 317WD_REPEATS_REGIONInterPro annotationAdd BLAST307
Repeati11 – 53WDPROSITE-ProRule annotationAdd BLAST43
Repeati59 – 100WDPROSITE-ProRule annotationAdd BLAST42
Repeati101 – 133WDPROSITE-ProRule annotationAdd BLAST33
Repeati144 – 187WDPROSITE-ProRule annotationAdd BLAST44
Repeati188 – 229WDPROSITE-ProRule annotationAdd BLAST42
Repeati287 – 317WDPROSITE-ProRule annotationAdd BLAST31

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0279. Eukaryota.
ENOG410XQGZ. LUCA.
GeneTreeiENSGT00890000139419.
InParanoidiH2LKU4.
OMAiQYGYPKR.
OrthoDBiEOG091G0KZQ.
TreeFamiTF300600.

Family and domain databases

InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF00400. WD40. 7 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 7 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

H2LKU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQMTVRGT LKGHSGWVTQ IATTPQYPDM ILSASRDKSI IMWKLTRDET
60 70 80 90 100
NYGIPQRSLK GHSHFVSDVV ISSDGQFALS GAWDGTLRLW DLTTGLTTRQ
110 120 130 140 150
FVGHTKDVLS VAFSADNRQI VSGSRDKTIK LWNTLGVCKY TIQDEGHTEW
160 170 180 190 200
VSCVRFSPNS SNPIIVSCGW DKMVKVWNLA NCKLKTNHIG HTGYLNTVTV
210 220 230 240 250
SPDGSLCASG GKDGQAMLWD LNEGKHLYTL DSGDVINALC FSPNRYWLCA
260 270 280 290 300
ATGPSIKIWD LEGKIIVDEL RQEVISTNSK AEPPQCTSLA WSADGQTLFA
310
GYTDNLIRVW QVTIGTR
Length:317
Mass (Da):35,079
Last modified:March 21, 2012 - v1
Checksum:i15AC799B1DA9100C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAAF04060153 Genomic DNA. No translation available.
BAAF04060154 Genomic DNA. No translation available.
RefSeqiXP_004073369.1. XM_004073321.2.

Genome annotation databases

EnsembliENSORLT00000006652; ENSORLP00000006651; ENSORLG00000005276.
GeneIDi101162055.

Similar proteinsi

Entry informationi

Entry nameiH2LKU4_ORYLA
AccessioniPrimary (citable) accession number: H2LKU4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: November 22, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported