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Protein
Submitted name:

SUPpressor

Gene

sup-12

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • pre-mRNA binding Source: WormBase
  • pre-mRNA intronic binding Source: WormBase

GO - Biological processi

  • alternative mRNA splicing, via spliceosome Source: WormBase
  • regulation of actin cytoskeleton organization Source: WormBase
  • regulation of alternative mRNA splicing, via spliceosome Source: WormBase
  • regulation of locomotion Source: WormBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SUPpressorImported
Gene namesi
Name:sup-12Imported
ORF Names:CELE_T22B2.4Imported, T22B2.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT22B2.4b ; CE42801 ; WBGene00006321 ; sup-12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiH2L051
PeptideAtlasiH2L051

Expressioni

Gene expression databases

BgeeiWBGene00006321
ExpressionAtlasiH2L051 baseline and differential

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4CH1NMR-A28-121[»]
ProteinModelPortaliH2L051
SMRiH2L051
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 112RRMInterPro annotationAdd BLAST78

Phylogenomic databases

eggNOGiKOG0149 Eukaryota
ENOG4111PGT LUCA
GeneTreeiENSGT00390000002308

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

H2L051-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYGQVQDPLV HAAAAALAQS TNAEPVVGSR DTMFTKIFVG GLPYHTSDKT
60 70 80 90 100
LHEYFEQFGD IEEAVVITDR NTQKSRGYGF VTMKDRASAE RACKDPNPII
110 120 130 140 150
DGRKANVNLA YLGAKPRTNV QLAALAAGQV QLPLTTQLQA LFQPRMGQVA

G
Length:151
Mass (Da):16,365
Last modified:March 21, 2012 - v1
Checksum:i9CB85691F71BD583
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD71429.1
RefSeqiNP_001129938.1, NM_001136466.2
UniGeneiCel.4999

Genome annotation databases

EnsemblMetazoaiT22B2.4b; T22B2.4b; WBGene00006321
GeneIDi180674

Similar proteinsi

Entry informationi

Entry nameiH2L051_CAEEL
AccessioniPrimary (citable) accession number: H2L051
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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