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Protein
Submitted name:

SUPpressor

Gene

sup-12

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • pre-mRNA binding Source: WormBase
  • pre-mRNA intronic binding Source: WormBase

GO - Biological processi

  • alternative mRNA splicing, via spliceosome Source: WormBase
  • regulation of actin cytoskeleton organization Source: WormBase
  • regulation of alternative mRNA splicing, via spliceosome Source: WormBase
  • regulation of locomotion Source: WormBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SUPpressorImported
Gene namesi
Name:sup-12Imported
ORF Names:CELE_T22B2.4Imported, T22B2.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT22B2.4b; CE42801; WBGene00006321; sup-12.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiH2L051.
PaxDbiH2L051.
PeptideAtlasiH2L051.

Expressioni

Gene expression databases

BgeeiWBGene00006321.
ExpressionAtlasiH2L051. baseline and differential.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4CH1NMR-A28-121[»]
ProteinModelPortaliH2L051.
SMRiH2L051.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 112RRMInterPro annotationAdd BLAST78

Phylogenomic databases

eggNOGiKOG0149. Eukaryota.
ENOG4111PGT. LUCA.
GeneTreeiENSGT00390000002308.

Family and domain databases

InterProiView protein in InterPro
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

H2L051-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYGQVQDPLV HAAAAALAQS TNAEPVVGSR DTMFTKIFVG GLPYHTSDKT
60 70 80 90 100
LHEYFEQFGD IEEAVVITDR NTQKSRGYGF VTMKDRASAE RACKDPNPII
110 120 130 140 150
DGRKANVNLA YLGAKPRTNV QLAALAAGQV QLPLTTQLQA LFQPRMGQVA

G
Length:151
Mass (Da):16,365
Last modified:March 21, 2012 - v1
Checksum:i9CB85691F71BD583
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD71429.1.
RefSeqiNP_001129938.1. NM_001136466.2.
UniGeneiCel.4999.

Genome annotation databases

EnsemblMetazoaiT22B2.4b; T22B2.4b; WBGene00006321.
GeneIDi180674.

Entry informationi

Entry nameiH2L051_CAEEL
AccessioniPrimary (citable) accession number: H2L051
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 25, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported