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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

SHJG_7610

Organism
Streptomyces hygroscopicus subsp. jinggangensis (strain 5008)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:SHJG_7610Imported
OrganismiStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)Imported
Taxonomic identifieri1133850 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000007170 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1133850.SHJG_7610.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 227DNA_LIGASE_A3InterPro annotationAdd BLAST123

Phylogenomic databases

eggNOGiENOG4105GN4. Bacteria.
COG1793. LUCA.
OMAiAGFRWHK.
OrthoDBiPOG091H08HZ.

Family and domain databases

InterProiView protein in InterPro
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS50160. DNA_LIGASE_A3. 1 hit.

Sequencei

Sequence statusi: Complete.

H2JQM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLPVMPPVK PMLAKSVAKI PPGMHYEAKW DGFRSIVFRD GAEVELGSRT
60 70 80 90 100
GKPLTRYFPE LVEALKERLP ERCVLDGEIV IARGGRLDFD ALTERIHPAA
110 120 130 140 150
SRVRMLAEKT PASFVAFDVL ALDDHALLDV PLTDRRALLD RALAGATPPV
160 170 180 190 200
HVAPSTTDIE VARQWFEQFE GAGLDGVVAK PLTLRYLQDE RAMFKIKHER
210 220 230 240 250
TADVVVAGYR FHKSGPVVGS LLLGLYDEQG RLQHVGVSAA FSMKKRAELV
260 270 280 290 300
EELEPLRMDD VSGHPWAAWT DETAHETARL PGAPSRWSGK KDLSWVPLRP
310 320 330 340 350
DRVAEVAYDH MENGQRFRHT ARFRRWRPDR TPESCTYAQL QEPVRYDLAE

ILGEKDGG
Length:358
Mass (Da):40,186
Last modified:March 21, 2012 - v1
Checksum:i3CAC96BE827FDF53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003275 Genomic DNA. Translation: AEY92877.1.
RefSeqiWP_014676162.1. NC_017765.1.

Genome annotation databases

EnsemblBacteriaiAEY92877; AEY92877; SHJG_7610.
KEGGishy:SHJG_7610.
PATRICifig|1133850.20.peg.8235.

Similar proteinsi

Entry informationi

Entry nameiH2JQM3_STRHJ
AccessioniPrimary (citable) accession number: H2JQM3
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: November 22, 2017
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported