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H2JQM3

- H2JQM3_STRHJ

UniProt

H2JQM3 - H2JQM3_STRHJ

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

SHJG_7610

Organism
Streptomyces hygroscopicus subsp. jinggangensis (strain 5008)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSHYG1133850:GLLU-7678-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:SHJG_7610Imported
    OrganismiStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)Imported
    Taxonomic identifieri1133850 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000007170: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H2JQM3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDLPVMPPVK PMLAKSVAKI PPGMHYEAKW DGFRSIVFRD GAEVELGSRT    50
    GKPLTRYFPE LVEALKERLP ERCVLDGEIV IARGGRLDFD ALTERIHPAA 100
    SRVRMLAEKT PASFVAFDVL ALDDHALLDV PLTDRRALLD RALAGATPPV 150
    HVAPSTTDIE VARQWFEQFE GAGLDGVVAK PLTLRYLQDE RAMFKIKHER 200
    TADVVVAGYR FHKSGPVVGS LLLGLYDEQG RLQHVGVSAA FSMKKRAELV 250
    EELEPLRMDD VSGHPWAAWT DETAHETARL PGAPSRWSGK KDLSWVPLRP 300
    DRVAEVAYDH MENGQRFRHT ARFRRWRPDR TPESCTYAQL QEPVRYDLAE 350
    ILGEKDGG 358
    Length:358
    Mass (Da):40,186
    Last modified:March 21, 2012 - v1
    Checksum:i3CAC96BE827FDF53
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003275 Genomic DNA. Translation: AEY92877.1.
    RefSeqiYP_006248750.1. NC_017765.1.

    Genome annotation databases

    EnsemblBacteriaiAEY92877; AEY92877; SHJG_7610.
    GeneIDi12811753.
    KEGGishy:SHJG_7610.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003275 Genomic DNA. Translation: AEY92877.1 .
    RefSeqi YP_006248750.1. NC_017765.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEY92877 ; AEY92877 ; SHJG_7610 .
    GeneIDi 12811753.
    KEGGi shy:SHJG_7610.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SHYG1133850:GLLU-7678-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic analysis of Streptomyces hygroscopicus subsp. jinggangensis 5008."
      Wu H., Bai L.
      Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 5008Imported.

    Entry informationi

    Entry nameiH2JQM3_STRHJ
    AccessioniPrimary (citable) accession number: H2JQM3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3