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H2JQM3 (H2JQM3_STRHJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEY92877.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2JQM3 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 3CAC96BE827FDF53

FASTA35840,186
        10         20         30         40         50         60 
MDLPVMPPVK PMLAKSVAKI PPGMHYEAKW DGFRSIVFRD GAEVELGSRT GKPLTRYFPE 

        70         80         90        100        110        120 
LVEALKERLP ERCVLDGEIV IARGGRLDFD ALTERIHPAA SRVRMLAEKT PASFVAFDVL 

       130        140        150        160        170        180 
ALDDHALLDV PLTDRRALLD RALAGATPPV HVAPSTTDIE VARQWFEQFE GAGLDGVVAK 

       190        200        210        220        230        240 
PLTLRYLQDE RAMFKIKHER TADVVVAGYR FHKSGPVVGS LLLGLYDEQG RLQHVGVSAA 

       250        260        270        280        290        300 
FSMKKRAELV EELEPLRMDD VSGHPWAAWT DETAHETARL PGAPSRWSGK KDLSWVPLRP 

       310        320        330        340        350 
DRVAEVAYDH MENGQRFRHT ARFRRWRPDR TPESCTYAQL QEPVRYDLAE ILGEKDGG 

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References

[1]"Genomic analysis of Streptomyces hygroscopicus subsp. jinggangensis 5008."
Wu H., Bai L.
Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 5008.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003275 Genomic DNA. Translation: AEY92877.1.
RefSeqYP_006248750.1. NC_017765.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEY92877; AEY92877; SHJG_7610.
GeneID12811753.
KEGGshy:SHJG_7610.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSHYG1133850:GLLU-7678-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2JQM3_STRHJ
AccessionPrimary (citable) accession number: H2JQM3
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)