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H2JQM3

- H2JQM3_STRHJ

UniProt

H2JQM3 - H2JQM3_STRHJ

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
SHJG_7610
Organism
Streptomyces hygroscopicus subsp. jinggangensis (strain 5008)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSHYG1133850:GLLU-7678-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:SHJG_7610Imported
OrganismiStreptomyces hygroscopicus subsp. jinggangensis (strain 5008)Imported
Taxonomic identifieri1133850 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000007170: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2JQM3-1 [UniParc]FASTAAdd to Basket

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MDLPVMPPVK PMLAKSVAKI PPGMHYEAKW DGFRSIVFRD GAEVELGSRT    50
GKPLTRYFPE LVEALKERLP ERCVLDGEIV IARGGRLDFD ALTERIHPAA 100
SRVRMLAEKT PASFVAFDVL ALDDHALLDV PLTDRRALLD RALAGATPPV 150
HVAPSTTDIE VARQWFEQFE GAGLDGVVAK PLTLRYLQDE RAMFKIKHER 200
TADVVVAGYR FHKSGPVVGS LLLGLYDEQG RLQHVGVSAA FSMKKRAELV 250
EELEPLRMDD VSGHPWAAWT DETAHETARL PGAPSRWSGK KDLSWVPLRP 300
DRVAEVAYDH MENGQRFRHT ARFRRWRPDR TPESCTYAQL QEPVRYDLAE 350
ILGEKDGG 358
Length:358
Mass (Da):40,186
Last modified:March 21, 2012 - v1
Checksum:i3CAC96BE827FDF53
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003275 Genomic DNA. Translation: AEY92877.1.
RefSeqiYP_006248750.1. NC_017765.1.

Genome annotation databases

EnsemblBacteriaiAEY92877; AEY92877; SHJG_7610.
GeneIDi12811753.
KEGGishy:SHJG_7610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003275 Genomic DNA. Translation: AEY92877.1 .
RefSeqi YP_006248750.1. NC_017765.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEY92877 ; AEY92877 ; SHJG_7610 .
GeneIDi 12811753.
KEGGi shy:SHJG_7610.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SHYG1133850:GLLU-7678-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genomic analysis of Streptomyces hygroscopicus subsp. jinggangensis 5008."
    Wu H., Bai L.
    Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 5008.

Entry informationi

Entry nameiH2JQM3_STRHJ
AccessioniPrimary (citable) accession number: H2JQM3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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