H2JQM3 (H2JQM3_STRHJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AEY92877.1

Gene names

Ordered Locus Names:

SHJG_7610 EMBL AEY92877.1

Organism

Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) [Complete proteome] [HAMAP] EMBL AEY92877.1

Taxonomic identifier

1133850 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces hygroscopicus › Streptomyces hygroscopicus subsp. jinggangensis

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEY92877.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2JQM3 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 3CAC96BE827FDF53	FASTA	358	40,186
	10 20 30 40 50 60 MDLPVMPPVK PMLAKSVAKI PPGMHYEAKW DGFRSIVFRD GAEVELGSRT GKPLTRYFPE 70 80 90 100 110 120 LVEALKERLP ERCVLDGEIV IARGGRLDFD ALTERIHPAA SRVRMLAEKT PASFVAFDVL 130 140 150 160 170 180 ALDDHALLDV PLTDRRALLD RALAGATPPV HVAPSTTDIE VARQWFEQFE GAGLDGVVAK 190 200 210 220 230 240 PLTLRYLQDE RAMFKIKHER TADVVVAGYR FHKSGPVVGS LLLGLYDEQG RLQHVGVSAA 250 260 270 280 290 300 FSMKKRAELV EELEPLRMDD VSGHPWAAWT DETAHETARL PGAPSRWSGK KDLSWVPLRP 310 320 330 340 350 DRVAEVAYDH MENGQRFRHT ARFRRWRPDR TPESCTYAQL QEPVRYDLAE ILGEKDGG

References

[1]	"Genomic analysis of Streptomyces hygroscopicus subsp. jinggangensis 5008." Wu H., Bai L. Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 5008.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003275 Genomic DNA. Translation: AEY92877.1.
RefSeq	YP_006248750.1. NC_017765.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEY92877; AEY92877; SHJG_7610.
GeneID	12811753.
KEGG	shy:SHJG_7610.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H2JQM3_STRHJ

Accession

Primary (citable) accession number: H2JQM3

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)