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Protein

Superoxide dismutase

Gene

Clo1100_1769

Organism
Clostridium sp. BNL1100
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciCSP755731:GJVM-1767-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:Clo1100_1769Imported
OrganismiClostridium sp. BNL1100Imported
Taxonomic identifieri755731 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000007324 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2JJK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYNYIPTGQ HQLPPLPYSY NALEPVISQR TLRIHHDKHH KAYVDGLNKA
60 70 80 90 100
EISLADARRK NDFEYIKYWA NELAFNGSGH ILHSIFWTIM APPGMGGNPG
110 120 130 140 150
MQTINYINNY FGNFGAFKEQ FTNAAEKVEG SGWAILIWQP AWRRLEILQA
160 170 180 190 200
EKHQNHTQWG GIPILVCDVW EHAYYLDYQN ERKKFIDSWW GIVNWNEVEN
210 220
RLIFASNGQI PLTTINTMSY KNP
Length:223
Mass (Da):25,969
Last modified:March 21, 2012 - v1
Checksum:iD7F4C7D5B250C577
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003259 Genomic DNA. Translation: AEY65979.1.
RefSeqiWP_014313352.1. NC_016791.1.
YP_005147784.1. NC_016791.1.

Genome annotation databases

EnsemblBacteriaiAEY65979; AEY65979; Clo1100_1769.
KEGGiclb:Clo1100_1769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003259 Genomic DNA. Translation: AEY65979.1.
RefSeqiWP_014313352.1. NC_016791.1.
YP_005147784.1. NC_016791.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEY65979; AEY65979; Clo1100_1769.
KEGGiclb:Clo1100_1769.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciCSP755731:GJVM-1767-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover."
    Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D.
    J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNL1100Imported.

Entry informationi

Entry nameiH2JJK5_9CLOT
AccessioniPrimary (citable) accession number: H2JJK5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 1, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.