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H2JI29 (H2JI29_9CLOT) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA polymerase LigD, polymerase domain protein EMBL AEY64680.1
Gene names
ORF Names:Clo1100_0394 EMBL AEY64680.1
OrganismClostridium sp. BNL1100 EMBL AEY64680.1
Taxonomic identifier755731 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H2JI29 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 1205F2C65A08F141

FASTA30334,669
        10         20         30         40         50         60 
MAAVTDIIKV EIENRVIDIK NPDKLFWPEA GVTKLEFVKT MTKLAPFLIK YSKNRMLTSI 

        70         80         90        100        110        120 
RYPHGINDKS FFQKEKPQGT PEWVETVEFN QKNYIALNSA ATLVWLCTQA ALELHTSFNV 

       130        140        150        160        170        180 
HEKPNHPSSL VFDLDPDDDL HFEDVAELAD RIHETLEALG IKGFIKTSGA TGLQIFVPTA 

       190        200        210        220        230        240 
SKFDYDTARS LNEFFAQYFA EKLISTVTIE RMKKKRDGKI YFDWQQMWIG KSMITAYSAR 

       250        260        270        280        290        300 
AVKSAAVSAP IEWSELNSIR PEMFTLKNIV NRLEQKGDIF EPSLKLDNSP QLNEILKQID 


TAR

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References

[1]"Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover."
Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D.
J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BNL1100 EMBL AEY64680.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003259 Genomic DNA. Translation: AEY64680.1.
RefSeqYP_005146485.1. NC_016791.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11722468.
KEGGclb:Clo1100_0394.

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR014145. LigD_pol.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2JI29_9CLOT
AccessionPrimary (citable) accession number: H2JI29
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: March 6, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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