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H2JI28

- H2JI28_9CLOT

UniProt

H2JI28 - H2JI28_9CLOT

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Protein
Submitted name:

ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein

Gene

Clo1100_0393

Organism
Clostridium sp. BNL1100
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSP755731:GJVM-393-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family proteinImported
Gene namesi
ORF Names:Clo1100_0393Imported
OrganismiClostridium sp. BNL1100Imported
Taxonomic identifieri755731 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000007324: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2JI28-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNWIIPMEPV ICPDVKEGSG CIHEIKWDGI RGMVYIQDGN VKIYTKKGKE
60 70 80 90 100
RTGFYPELDV LRKGLGGKNA ILDGEFVVLD EDGVPSFYKS LIRERVRNSG
110 120 130 140 150
KLQYYTSSYP VCYMVFDILQ YGDDILVNMP LIERKQILEE NLSSLTGNDT
160 170 180 190 200
KIFLAKMYKD GKELFEKMKK QNMEGIVSKK TDSLYIGGKK HDAWFKTKFI
210 220 230 240 250
KKMLCIVGGI QWKSIHPNSL VLGIKPPDSE KLVYVGKASI GLKQSDLMLI
260 270 280 290 300
KEYSGQLEQE ECPFTTDEII QLDKTGEKFT WLYPALTCWI SFLELTNDGH
310 320
LRHPKIEGFA VLPVEEADGK VLTD
Length:324
Mass (Da):36,913
Last modified:March 21, 2012 - v1
Checksum:i2C6E22850EE546D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003259 Genomic DNA. Translation: AEY64679.1.
RefSeqiWP_014312081.1. NC_016791.1.
YP_005146484.1. NC_016791.1.

Genome annotation databases

EnsemblBacteriaiAEY64679; AEY64679; Clo1100_0393.
GeneIDi11723553.
KEGGiclb:Clo1100_0393.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003259 Genomic DNA. Translation: AEY64679.1 .
RefSeqi WP_014312081.1. NC_016791.1.
YP_005146484.1. NC_016791.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEY64679 ; AEY64679 ; Clo1100_0393 .
GeneIDi 11723553.
KEGGi clb:Clo1100_0393.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci CSP755731:GJVM-393-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover."
    Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D.
    J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNL1100Imported.

Entry informationi

Entry nameiH2JI28_9CLOT
AccessioniPrimary (citable) accession number: H2JI28
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 1, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3