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H2JI28 (H2JI28_9CLOT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Clo1100_0393 EMBL AEY64679.1
OrganismClostridium sp. BNL1100 [Complete proteome] EMBL AEY64679.1
Taxonomic identifier755731 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length324 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
H2JI28 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 2C6E22850EE546D2

FASTA32436,913
        10         20         30         40         50         60 
MNWIIPMEPV ICPDVKEGSG CIHEIKWDGI RGMVYIQDGN VKIYTKKGKE RTGFYPELDV 

        70         80         90        100        110        120 
LRKGLGGKNA ILDGEFVVLD EDGVPSFYKS LIRERVRNSG KLQYYTSSYP VCYMVFDILQ 

       130        140        150        160        170        180 
YGDDILVNMP LIERKQILEE NLSSLTGNDT KIFLAKMYKD GKELFEKMKK QNMEGIVSKK 

       190        200        210        220        230        240 
TDSLYIGGKK HDAWFKTKFI KKMLCIVGGI QWKSIHPNSL VLGIKPPDSE KLVYVGKASI 

       250        260        270        280        290        300 
GLKQSDLMLI KEYSGQLEQE ECPFTTDEII QLDKTGEKFT WLYPALTCWI SFLELTNDGH 

       310        320 
LRHPKIEGFA VLPVEEADGK VLTD 

« Hide

References

[1]"Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover."
Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D.
J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BNL1100 EMBL AEY64679.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003259 Genomic DNA. Translation: AEY64679.1.
RefSeqYP_005146484.1. NC_016791.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEY64679; AEY64679; Clo1100_0393.
GeneID11723553.
KEGGclb:Clo1100_0393.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycCSP755731:GJVM-393-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2JI28_9CLOT
AccessionPrimary (citable) accession number: H2JI28
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)