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H2JI28

- H2JI28_9CLOT

UniProt

H2JI28 - H2JI28_9CLOT

Protein
Submitted name:

ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein

Gene

Clo1100_0393

Organism
Clostridium sp. BNL1100
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCSP755731:GJVM-393-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family proteinImported
    Gene namesi
    ORF Names:Clo1100_0393Imported
    OrganismiClostridium sp. BNL1100Imported
    Taxonomic identifieri755731 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000007324: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H2JI28-1 [UniParc]FASTAAdd to Basket

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    MNWIIPMEPV ICPDVKEGSG CIHEIKWDGI RGMVYIQDGN VKIYTKKGKE    50
    RTGFYPELDV LRKGLGGKNA ILDGEFVVLD EDGVPSFYKS LIRERVRNSG 100
    KLQYYTSSYP VCYMVFDILQ YGDDILVNMP LIERKQILEE NLSSLTGNDT 150
    KIFLAKMYKD GKELFEKMKK QNMEGIVSKK TDSLYIGGKK HDAWFKTKFI 200
    KKMLCIVGGI QWKSIHPNSL VLGIKPPDSE KLVYVGKASI GLKQSDLMLI 250
    KEYSGQLEQE ECPFTTDEII QLDKTGEKFT WLYPALTCWI SFLELTNDGH 300
    LRHPKIEGFA VLPVEEADGK VLTD 324
    Length:324
    Mass (Da):36,913
    Last modified:March 21, 2012 - v1
    Checksum:i2C6E22850EE546D2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003259 Genomic DNA. Translation: AEY64679.1.
    RefSeqiWP_014312081.1. NC_016791.1.
    YP_005146484.1. NC_016791.1.

    Genome annotation databases

    EnsemblBacteriaiAEY64679; AEY64679; Clo1100_0393.
    GeneIDi11723553.
    KEGGiclb:Clo1100_0393.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003259 Genomic DNA. Translation: AEY64679.1 .
    RefSeqi WP_014312081.1. NC_016791.1.
    YP_005146484.1. NC_016791.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEY64679 ; AEY64679 ; Clo1100_0393 .
    GeneIDi 11723553.
    KEGGi clb:Clo1100_0393.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci CSP755731:GJVM-393-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover."
      Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D.
      J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BNL1100Imported.

    Entry informationi

    Entry nameiH2JI28_9CLOT
    AccessioniPrimary (citable) accession number: H2JI28
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3