H2JI28 (H2JI28_9CLOT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein EMBL AEY64679.1

Gene names

ORF Names:

Clo1100_0393 EMBL AEY64679.1

Organism

Clostridium sp. BNL1100 EMBL AEY64679.1

Taxonomic identifier

755731 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEY64679.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2JI28 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 2C6E22850EE546D2	FASTA	324	36,913
	10 20 30 40 50 60 MNWIIPMEPV ICPDVKEGSG CIHEIKWDGI RGMVYIQDGN VKIYTKKGKE RTGFYPELDV 70 80 90 100 110 120 LRKGLGGKNA ILDGEFVVLD EDGVPSFYKS LIRERVRNSG KLQYYTSSYP VCYMVFDILQ 130 140 150 160 170 180 YGDDILVNMP LIERKQILEE NLSSLTGNDT KIFLAKMYKD GKELFEKMKK QNMEGIVSKK 190 200 210 220 230 240 TDSLYIGGKK HDAWFKTKFI KKMLCIVGGI QWKSIHPNSL VLGIKPPDSE KLVYVGKASI 250 260 270 280 290 300 GLKQSDLMLI KEYSGQLEQE ECPFTTDEII QLDKTGEKFT WLYPALTCWI SFLELTNDGH 310 320 LRHPKIEGFA VLPVEEADGK VLTD

References

[1]	"Complete Genome Sequence of Clostridium sp. Strain BNL1100, a Cellulolytic Mesophile Isolated from Corn Stover." Li L.L., Taghavi S., Izquierdo J.A., van der Lelie D. J. Bacteriol. 194:6982-6983(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BNL1100 EMBL AEY64679.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003259 Genomic DNA. Translation: AEY64679.1.
RefSeq	YP_005146484.1. NC_016791.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	11723553.
KEGG	clb:Clo1100_0393.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H2JI28_9CLOT

Accession

Primary (citable) accession number: H2JI28

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	March 6, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)