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H2J5C6 (H2J5C6_MARPK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Marpi_0543 EMBL AEX84984.1
OrganismMarinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) [Complete proteome] [HAMAP] EMBL AEX84984.1
Taxonomic identifier443254 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeMarinitoga

Protein attributes

Sequence length612 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL AEX84984.1
Chain23 – 612590 Potential EMBL AEX84984.1
PRO_5000855891

Sequences

Sequence LengthMass (Da)Tools
H2J5C6 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: D36D493281825280

FASTA61271,664
        10         20         30         40         50         60 
MKKLVVTFVF MFFLSFFFIL NGCVNQTLKT SYHEKKQILK EVKSEWGNAY FRGTPNNWGI 

        70         80         90        100        110        120 
THMSKIGPHT WQIIIKFNNG DGYGKPRFKI DHFGDWKESY PANDYEVEPY TTYKITFYDD 

       130        140        150        160        170        180 
THYIKVEKYI KAVNGVMLQA FQWYLPEYNE KTKSGLWVEL SKKIPDLALM GITALWLPPA 

       190        200        210        220        230        240 
YKGQAGKSDV GYGVYDLYDL GEFNQKGTIS TKYGTKEQYL KLIENAHLYN IQVYGDIVFN 

       250        260        270        280        290        300 
HKMGADNTEW VNATKVSWNN RNIEIENKTI KAWTLFNFPG RNNKYSDFKW RWYHFDGVDW 

       310        320        330        340        350        360 
DQNTGEKAIF RFNGIGKAWD WEVDDENFNY DYLMGADLDM DHPEVVQELK KWGKWYVNFT 

       370        380        390        400        410        420 
KIDGFRLDAV KHIKFSFFND WLDYMRNVLG KELFTVGEYW STDINKLENY ISKTEGRMSL 

       430        440        450        460        470        480 
FDVPLHQHFY EASNSGGYYD MRNIFNGTLV QKNPIKAVTF VENHDTQPGQ SLSSPVQDWF 

       490        500        510        520        530        540 
KPLAYAMILL RKDGYPCVFY GDMYGAPGIK EQYGTIKKLI EARKLYSYGK QYDYLDHQDI 

       550        560        570        580        590        600 
IGWTRLGDEE HPKSMAVILS DGPGGSKWMY VGKKKTKFID LLGNIKEEIW TNDYGWAEFK 

       610 
VNGGSVSVWV EE 

« Hide

References

[1]"Complete sequence of chromosome of Marinitoga piezophila KA3."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Jebbar M. expand/collapse author list , Vannier P., Oger P., Cario A., Bartlett D., Noll K.M., Woyke T.
Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14283 / JCM 11233 / KA3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003257 Genomic DNA. Translation: AEX84984.1.
RefSeqYP_005096282.1. NC_016751.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX84984; AEX84984; Marpi_0543.
GeneID11602787.
KEGGmpz:Marpi_0543.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycMPIE443254:GI5V-543-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2J5C6_MARPK
AccessionPrimary (citable) accession number: H2J5C6
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)