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H2J2B4 (H2J2B4_RAHAC) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H2J2B4 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: C4FF58278186AA75

FASTA54262,628
        10         20         30         40         50         60 
MNSDWYKKAI IYQVDTAYFF DANNDGIGDI SGILKHLDYI RGLGANALWL TPFYLTPFRD 

        70         80         90        100        110        120 
DGYDVKDHLT VDPRFGDIAD MVMLLEQAEE MGLRVIVELV LQHTSSEHRW FQEARKDRHS 

       130        140        150        160        170        180 
PYRNYYIWAD EPPENDDPPM FPGVEKSVWS WDEEAQQYYR HMFYHDEPDL NLACPDLINE 

       190        200        210        220        230        240 
IERVIMYWLR LGVSGFRLDA ASHMIKQAGK GDVKKGLSLL NHLRDFIAVR HPETILLGEV 

       250        260        270        280        290        300 
DVPPQHYNDY FGNNDRLHML LSFSINKHMF LSFAHKDARP LVKALKEIPA PPSRACLTHW 

       310        320        330        340        350        360 
LRNHDELDLG DLSPAERRDV IKEFGPAENM QIYQRGLRRR LASMFENDIA RIAMAYSVLF 

       370        380        390        400        410        420 
SLPGTPVIRY GDEIGMSENL SLNERNAIRT PMQWDTTRNA GFSQADRDNL IAPVNVRGPG 

       430        440        450        460        470        480 
RYWRVNVSKS QIEDHSLLHL VSKMTRTRLG CKEIGSGTYR IIDLKIPSLF AIRYDYDGEA 

       490        500        510        520        530        540 
LLMMTNLSDK KVQVELNEPE TMMLTELLAD KEYARSGMLK ASARFPVNGY GYRWFSVKHI 


DG 

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References

[1]"Complete sequence of plasmid 2 of Rahnella aquatilis CIP 78.65."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P., Martinez R., Woyke T.
Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003246 Genomic DNA. Translation: AEX54731.1.
RefSeqYP_005202463.1. NC_016819.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX54731; AEX54731; Rahaq2_5023.
GeneID11789662.
KEGGraq:Rahaq2_5023.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameH2J2B4_RAHAC
AccessionPrimary (citable) accession number: H2J2B4
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 16, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)