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Protein
Submitted name:

Glycosidase

Gene

Rahaq2_5023

Organism
Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
GlycosidaseImported
Gene namesi
Ordered Locus Names:Rahaq2_5023Imported
Encoded oniPlasmid pRahaq202Imported
OrganismiRahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65)Imported
Taxonomic identifieri745277 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeRahnella
ProteomesiUP000009010 Componenti: Plasmid pRahaq202

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

H2J2B4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSDWYKKAI IYQVDTAYFF DANNDGIGDI SGILKHLDYI RGLGANALWL
60 70 80 90 100
TPFYLTPFRD DGYDVKDHLT VDPRFGDIAD MVMLLEQAEE MGLRVIVELV
110 120 130 140 150
LQHTSSEHRW FQEARKDRHS PYRNYYIWAD EPPENDDPPM FPGVEKSVWS
160 170 180 190 200
WDEEAQQYYR HMFYHDEPDL NLACPDLINE IERVIMYWLR LGVSGFRLDA
210 220 230 240 250
ASHMIKQAGK GDVKKGLSLL NHLRDFIAVR HPETILLGEV DVPPQHYNDY
260 270 280 290 300
FGNNDRLHML LSFSINKHMF LSFAHKDARP LVKALKEIPA PPSRACLTHW
310 320 330 340 350
LRNHDELDLG DLSPAERRDV IKEFGPAENM QIYQRGLRRR LASMFENDIA
360 370 380 390 400
RIAMAYSVLF SLPGTPVIRY GDEIGMSENL SLNERNAIRT PMQWDTTRNA
410 420 430 440 450
GFSQADRDNL IAPVNVRGPG RYWRVNVSKS QIEDHSLLHL VSKMTRTRLG
460 470 480 490 500
CKEIGSGTYR IIDLKIPSLF AIRYDYDGEA LLMMTNLSDK KVQVELNEPE
510 520 530 540
TMMLTELLAD KEYARSGMLK ASARFPVNGY GYRWFSVKHI DG
Length:542
Mass (Da):62,628
Last modified:March 21, 2012 - v1
Checksum:iC4FF58278186AA75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003246 Genomic DNA. Translation: AEX54731.1.
RefSeqiYP_005202463.1. NC_016819.1.

Genome annotation databases

EnsemblBacteriaiAEX54731; AEX54731; Rahaq2_5023.
KFC99516; KFC99516; GRAQ_04893.
KEGGiraq:Rahaq2_5023.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003246 Genomic DNA. Translation: AEX54731.1.
RefSeqiYP_005202463.1. NC_016819.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEX54731; AEX54731; Rahaq2_5023.
KFC99516; KFC99516; GRAQ_04893.
KEGGiraq:Rahaq2_5023.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of plasmid 2 of Rahnella aquatilis CIP 78.65."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P., Martinez R., Woyke T.
    Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65Imported.

Entry informationi

Entry nameiH2J2B4_RAHAC
AccessioniPrimary (citable) accession number: H2J2B4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 29, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.