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H2IYL6 (H2IYL6_RAHAC) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length357 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2IYL6 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: AC74F197C90E2193

FASTA35738,340
        10         20         30         40         50         60 
MPRPISATLS LSALTQNLNI IRGFAPNSKV WTVVKANGYG HGISRIWRSL SATDGFALLD 

        70         80         90        100        110        120 
FNEAILLRES GWQGPILLLE GFFTAEDLAM VDHYRLTTSI HSEWQIKALA QASVSQPVSI 

       130        140        150        160        170        180 
YLKVNSGMNR LGFAPERAGA VWQQLRELKQ VGEITLMSHF ATADSVEGVD AQMTVINLAG 

       190        200        210        220        230        240 
QNIRGPRCLA NSAATLWHPH THHDWIRPGI IIYGASPSGE WNDIAHTGLQ PVMTLKSELI 

       250        260        270        280        290        300 
AIQELNAGAR VGYGGRYSVT SPQRIGVVAC GYADGYPRHA PSGTPVWVDG VRTTTTGTVS 

       310        320        330        340        350 
MDMLAVDLTP CPQAQIGAPV ELWGNNLPVD DVATAAGTLG YELLSALAPR VPVSTIG

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References

[1]"Complete sequence of chromosome of Rahnella aquatilis CIP 78.65."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P., Martinez R., Woyke T.
Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003244 Genomic DNA. Translation: AEX52027.1.
RefSeqYP_005200167.1. NC_016818.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX52027; AEX52027; Rahaq2_2166.
GeneID11794011.
KEGGraq:Rahaq2_2166.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2IYL6_RAHAC
AccessionPrimary (citable) accession number: H2IYL6
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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