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H2IMV7 (H2IMV7_9VIBR) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:malS EMBL AEX25147.1
ORF Names:VEJY3_23691 EMBL AEX25147.1
OrganismVibrio sp. EJY3 [Complete proteome] EMBL AEX25147.1
Taxonomic identifier1116375 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length687 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
H2IMV7 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: CDF9CDE10F43237E

FASTA68776,922
        10         20         30         40         50         60 
MKLNLITTTL LLASASAIAE PNITISTTTN SRDFPLSAEQ PLVVPLTKDG YTLKITGIDG 

        70         80         90        100        110        120 
SCTAPDGQNV KFNTPISLNC GEPTELALKI RFTGDYSFAY DEQAKTLLFK REPKKAAKTE 

       130        140        150        160        170        180 
FKRPIPKVQC EVYQGGEVSI ALGDSFPDGT KLRDAYSGQV VEVKNQQVSL VPDQASGGIV 

       190        200        210        220        230        240 
LLEPMKKTKQ AIPFNYRNAN IYFVMVDRFN NADSSNDASY GRKKDGKEEI GTFHGGDLKG 

       250        260        270        280        290        300 
VIDKLDYIKS LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGSE 

       310        320        330        340        350        360 
ADLKTLVEEA HKRGLKVLMD AVINHTGYST LADLQFDGIE VLKPGADLPE KWANWQPKSG 

       370        380        390        400        410        420 
ENWHSYHHYI DYQSPNWANW WGGDWVRAGL PGYPEPGSSD ITMSLAGLPD FVTESDKAVT 

       430        440        450        460        470        480 
PPKWLLDNPG TRVKARDNFT VSDYLIEWQT DWVKRFGIDG YRVDTVKHVE GDVWKRLKQE 

       490        500        510        520        530        540 
ASQSLEQWRK ENGRSGQPFW MMGEVWGHTA YRSPYFDDGF DALINFDMQK KLDKGAACFS 

       550        560        570        580        590        600 
QMAETYQSYA DTIANEKDFN PVSYMSSHDT ELFFSRFKDY AMQRNAANAL LLSPGAVQVY 

       610        620        630        640        650        660 
YGDEVGRNIG PYADDFHQGT RSDMVWKLTD EKQSLLKHWQ TLGQFRKAHP AIGAGKHHVI 

       670        680 
AQEGAYVFSR TLAGDKVVVA FVGREKP 

« Hide

References

[1]"Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-L-Galactose as a Sole Carbon Source."
Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G.
J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: EJY3 EMBL AEX25147.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003242 Genomic DNA. Translation: AEX25147.1.
RefSeqYP_005026122.1. NC_016614.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX25147; AEX25147; VEJY3_23691.
GeneID11669605.
KEGGvej:VEJY3_23691.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycVSP1116375:GJV8-4800-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2IMV7_9VIBR
AccessionPrimary (citable) accession number: H2IMV7
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)