H2IEV1 (H2IEV1_9VIBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118
ORF Names:	VEJY3_14160 EMBL AEX23306.1, VEJY3_14800 EMBL AEX23432.1

Organism

Vibrio sp. EJY3 EMBL AEX23432.1

Taxonomic identifier

1116375 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	394 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding HAMAP-Rule MF_00118 RuleBase RU000323 Nucleotide-binding
Molecular function	Elongation factor HAMAP-Rule MF_00118 RuleBase RU000325 EMBL AEX23432.1
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	81 – 85	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	136 – 139	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	H2IEV1 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: AEA0BE3061F180F4	FASTA	394	43,092
	10 20 30 40 50 60 MSKAKFERVK PHVNVGTIGH VDHGKTTLTA AICTTLAKVY GGEAKDFASI DNAPEERERG 70 80 90 100 110 120 ITISTSHVEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GGILVVAATD GPMPQTREHI 130 140 150 160 170 180 LLGRQVGIPY IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALGALN 190 200 210 220 230 240 GEEQWEAKIV ELAEALDSYI PEPERAVDLP FLMPIEDVFS IQGRGTVVTG RIERGILNVG 250 260 270 280 290 300 DEVAIVGIKD TITTTCTGVE MFRKLLDEGR AGENVGALLR GTKRDEVERG QVLAKPGSIT 310 320 330 340 350 360 PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG DITLPEGVEM VMPGDNVQMT 370 380 390 VELIAPIAMD EGLRFAIREG GRTVGAGVVA KIFD

References

[1]

"Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-L-Galactose as a Sole Carbon Source." Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G. J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: EJY3 EMBL AEX23432.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003241 Genomic DNA. Translation: AEX23306.1. CP003241 Genomic DNA. Translation: AEX23432.1.
RefSeq	YP_005024285.1. NC_016613.1. YP_005024411.1. NC_016613.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEX23306; AEX23306; VEJY3_14160. AEX23432; AEX23432; VEJY3_14800.
GeneID	11664703. 11664847.
KEGG	vej:VEJY3_14160. vej:VEJY3_14800.
Phylogenomic databases
KO	K02358.
Enzyme and pathway databases
BioCyc	VSP1116375:GJV8-2905-MONOMER. VSP1116375:GJV8-3049-MONOMER.
Family and domain databases
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR027417. P-loop_NTPase. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF52540. SSF52540. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H2IEV1_9VIBR

Accession

Primary (citable) accession number: H2IEV1

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	May 29, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)