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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio sp. (strain EJY3)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381UniRule annotation
Active sitei544 – 5441UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciVSP1116375:GJV8-2896-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:VEJY3_14115Imported
OrganismiVibrio sp. (strain EJY3)Imported
Taxonomic identifieri1116375 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006799 Componenti: Chromosome 1

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2IDJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNEKYAALKS NVRMLGHLLG NTIHDAHGEE IFEKVETIRK LSKSAQAGNQ
60 70 80 90 100
ADKESLIEEI KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC
110 120 130 140 150
EPDAINSLFS KLVQNDVSKL DTAQAVRDLN IELVLTAHPT EITRRTMINK
160 170 180 190 200
LVKINECLSK LELSDLSSKE RKKTERRLEQ LIAQGWHSDV IRQQRPTPLD
210 220 230 240 250
EAKWGFAVVE NSLWEAVPEF LREMNDRLES YLGEGLPIDA RPVHFSSWMG
260 270 280 290 300
GDRDGNPFVT HSITREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR
310 320 330 340 350
ELAGDDQHEP YRAILKQLRS LLNETKDILD AKINGQKLAV KAPLQKVEQL
360 370 380 390 400
WEPLYACYQS LHECGMGVIA DGSLLDTLRR VKAFGVHLVR LDIRQESTRH
410 420 430 440 450
ADALSELTRH LGIGDYQQWS EQDKLAFLTN ELASKRPLLP RDWEPSEPVQ
460 470 480 490 500
EVLDTCKIIA AQSREAFGAY VISMARTASD VLAVHLLLQE SGCPYRMDVC
510 520 530 540 550
PLFETLDDLN NAESVIKQLM DIDLYRGFIQ NHQMVMIGYS DSAKDAGVMS
560 570 580 590 600
AGWAQYHAME SLVKVAEEEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK
610 620 630 640 650
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE
660 670 680 690 700
WRDLMEVLSQ VSCEAYRSVV RGEPDFVPYF RQATPELELG KLPLGSRPAK
710 720 730 740 750
RNPKGGVESL RAIPWIFSWS QNRLVLPAWL GAGEAIQYSI DKGHQALLEE
760 770 780 790 800
MCREWPFFST RLGMLEMVYS KCNIDISRYY DLRLVDESLR PLGERLREQL
810 820 830 840 850
QKDIKAVLNV ENNENLMQHD PWGLESIRLR NIYVEPLNML QAELLYRTRQ
860 870
NEEASADLEE ALMVTIAGIA AGMRNTG
Length:877
Mass (Da):99,189
Last modified:March 21, 2012 - v1
Checksum:iFD3178A6462A987E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003241 Genomic DNA. Translation: AEX23297.1.
RefSeqiWP_014233161.1. NC_016613.1.
YP_005024276.1. NC_016613.1.

Genome annotation databases

EnsemblBacteriaiAEX23297; AEX23297; VEJY3_14115.
KEGGivej:VEJY3_14115.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003241 Genomic DNA. Translation: AEX23297.1.
RefSeqiWP_014233161.1. NC_016613.1.
YP_005024276.1. NC_016613.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEX23297; AEX23297; VEJY3_14115.
KEGGivej:VEJY3_14115.

Phylogenomic databases

KOiK01595.

Enzyme and pathway databases

BioCyciVSP1116375:GJV8-2896-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Vibrio sp. strain EJY3, an agarolytic marine bacterium metabolizing 3,6-anhydro-L-galactose as a sole carbon source."
    Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G.
    J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EJY3Imported.

Entry informationi

Entry nameiH2IDJ7_VIBSJ
AccessioniPrimary (citable) accession number: H2IDJ7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: May 27, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.