H2IC24 (H2IC24_9VIBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase EMBL AEX21904.1
EC=6.5.1.1 EMBL AEX21904.1

Gene names

ORF Names:

VEJY3_07070 EMBL AEX21904.1

Organism

Vibrio sp. EJY3 EMBL AEX21904.1

Taxonomic identifier

1116375 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AEX21904.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2IC24 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 7F8F2BE6B6F81D9B	FASTA	280	31,984
	10 20 30 40 50 60 MPIKMTLIAL AIMASTHVQA HPTVAPLVSL AETYQDGIDV SQYWYSEKLD GIRAYWTGQH 70 80 90 100 110 120 LVTRNGNRIH APKWFTAPLP DYPLDGELWA GRGNFHLVQQ TVLDKTPVDS AWKKVDFMLF 130 140 150 160 170 180 DMPYSAGDYR KRYYNIQNLV YELDEPHIKY VEHMTIQDEE HLFSQLDKIA LADGEGVMLR 190 200 210 220 230 240 KVSSRYQAGR GSDLLKLKRF ADTEAQVIGH KPGTGRLLGM MGAILVRMPD GTEFYIGSGF 250 260 270 280 TDELRRNPPQ LGSIITFRYN GFTHNGKPKF ARFLRERSKE

References

[1]

"Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-L-Galactose as a Sole Carbon Source." Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G. J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: EJY3 EMBL AEX21904.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003241 Genomic DNA. Translation: AEX21904.1.
RefSeq	YP_005022882.1. NC_016613.1.
3D structure databases
ProteinModelPortal	H2IC24.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEX21904; AEX21904; VEJY3_07070.
GeneID	11665824.
KEGG	vej:VEJY3_07070.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H2IC24_9VIBR

Accession

Primary (citable) accession number: H2IC24

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)