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Protein
Submitted name:

DNA ligase

Gene

VEJY3_07070

Organism
Vibrio sp. (strain EJY3)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:VEJY3_07070Imported
OrganismiVibrio sp. (strain EJY3)Imported
Taxonomic identifieri1116375 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500356211221 – 280Sequence analysisAdd BLAST260

Interactioni

Protein-protein interaction databases

STRINGi1116375.VEJY3_07070

Structurei

3D structure databases

ProteinModelPortaliH2IC24
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini116 – 230DNA_LIGASE_A3InterPro annotationAdd BLAST115

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E1T Bacteria
COG1793 LUCA
KOiK10747

Family and domain databases

InterProiView protein in InterPro
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR029319 DNA_ligase_OB
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF01068 DNA_ligase_A_M, 1 hit
PF14743 DNA_ligase_OB_2, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

H2IC24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPIKMTLIAL AIMASTHVQA HPTVAPLVSL AETYQDGIDV SQYWYSEKLD
60 70 80 90 100
GIRAYWTGQH LVTRNGNRIH APKWFTAPLP DYPLDGELWA GRGNFHLVQQ
110 120 130 140 150
TVLDKTPVDS AWKKVDFMLF DMPYSAGDYR KRYYNIQNLV YELDEPHIKY
160 170 180 190 200
VEHMTIQDEE HLFSQLDKIA LADGEGVMLR KVSSRYQAGR GSDLLKLKRF
210 220 230 240 250
ADTEAQVIGH KPGTGRLLGM MGAILVRMPD GTEFYIGSGF TDELRRNPPQ
260 270 280
LGSIITFRYN GFTHNGKPKF ARFLRERSKE
Length:280
Mass (Da):31,984
Last modified:March 21, 2012 - v1
Checksum:i7F8F2BE6B6F81D9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003241 Genomic DNA Translation: AEX21904.1

Genome annotation databases

EnsemblBacteriaiAEX21904; AEX21904; VEJY3_07070
KEGGivej:VEJY3_07070
PATRICifig|1116375.3.peg.1416

Entry informationi

Entry nameiH2IC24_VIBSJ
AccessioniPrimary (citable) accession number: H2IC24
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: March 28, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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