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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Vibrio sp. (strain EJY3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciVSP1116375:GJV8-19-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:VEJY3_00090Imported
OrganismiVibrio sp. (strain EJY3)Imported
Taxonomic identifieri1116375 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006799 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi1116375.VEJY3_00090.

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

H2IAK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTILALSI SLLSACSQIP ENAIVLSVGD DKAMFEQNDQ GLLVAEQKLD
60 70 80 90 100
KGNYTFTIAD SKQSCGSSFA LAEESRIKFN TPLKMDNCAT DATMPLRIFK
110 120 130 140 150
ANTYQFTLNP TTNELTVKIK PRQSQVTSFT CPVATDTAKT INVAETFNDG
160 170 180 190 200
TLVRDALTGQ ETTVTDGAVT LQPGPMSQGL LLLEEVEQQA NKPFSWDNAT
210 220 230 240 250
IYFVMTDRFY NGNPNNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES
260 270 280 290 300
LGVNAIWLTS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTE
310 320 330 340 350
DELRTFIDTA HKKGIRIIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK
360 370 380 390 400
QVLGEKWTDW QPKSGQSWHS FNDYVKYSDN EAWEKWWGKA WIRTDIGNYD
410 420 430 440 450
APGYNDISMS LNYLPDLKTE STQKTGLPNF FHNKDTGARD EQKTPREHLI
460 470 480 490 500
TWLSDWVRDY GVDGFRVDTA KHVEMDAWSE LKASTAQALA EWKQNNPEKA
510 520 530 540 550
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFANL
560 570 580 590 600
DSDYRRYAEQ INNDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM
610 620 630 640 650
LTPGAVQIYY GDEIARDFGH TGSDTHQGTR SDMPWDKIHG ERKDLLQHWQ
660 670 680 690
KLGEFRKRHP AVAQGKHVTR NQEGYYAFER QYQDDKVLIV YTGE
Length:694
Mass (Da):78,863
Last modified:March 21, 2012 - v1
Checksum:i98DDE49B2D035F88
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003241 Genomic DNA. Translation: AEX20518.1.
RefSeqiWP_014230429.1. NC_016613.1.

Genome annotation databases

EnsemblBacteriaiAEX20518; AEX20518; VEJY3_00090.
KEGGivej:VEJY3_00090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003241 Genomic DNA. Translation: AEX20518.1.
RefSeqiWP_014230429.1. NC_016613.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1116375.VEJY3_00090.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEX20518; AEX20518; VEJY3_00090.
KEGGivej:VEJY3_00090.

Phylogenomic databases

KOiK01176.

Enzyme and pathway databases

BioCyciVSP1116375:GJV8-19-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Vibrio sp. strain EJY3, an agarolytic marine bacterium metabolizing 3,6-anhydro-L-galactose as a sole carbon source."
    Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G.
    J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EJY3Imported.

Entry informationi

Entry nameiH2IAK1_VIBSJ
AccessioniPrimary (citable) accession number: H2IAK1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: July 22, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.