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H2IA85 (H2IA85_9VIBR) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:VEJY3_05975 EMBL AEX21689.1
OrganismVibrio sp. EJY3 [Complete proteome] EMBL AEX21689.1
Taxonomic identifier1116375 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
H2IA85 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 24950F6C741E04B7

FASTA54861,198
        10         20         30         40         50         60 
MVKEQKTADV SFESLLKIFT VPEGPDSTLT KIEEGLSRNL NQFLREHIVA EEKPLREIEK 

        70         80         90        100        110        120 
DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSAPSFIGH MTSALPYFLM PLSKIMIALN 

       130        140        150        160        170        180 
QNLVKIETSK AFTPLERQVL GMLHRLIYAQ PNTFYDQWMH SANHSLGAFC SGGTIANITA 

       190        200        210        220        230        240 
LWVARNKALK ADGEFKGVEK EGLFKAMKHY GYEGLAIMVS ERGHYSLKKA ADVLGLGQEG 

       250        260        270        280        290        300 
LVAVKTDANN RIIVDDLKAK ISELKKQNIK PIAVIGVAGT TETGNVDPLA SIAEVCQEHD 

       310        320        330        340        350        360 
CHFHVDAAWG GATLMSNHHR HLLNGIELAD SVTIDAHKQL YIPMGAGMVL FKDPDAMKSI 

       370        380        390        400        410        420 
EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR PGYELLIDQS IEKARYFADL 

       430        440        450        460        470        480 
IKKQDDFELV SEPELCLLTY RYLPPNIREA LEKADGTQKE ELNELINELT QFIQKRQRET 

       490        500        510        520        530        540 
GKSFVSRTTL NPEHWERMST IVFRVVLANP LTSTDIFDAV LDEQRLIAQQ APNLNAKIQE 


LASKILAS 

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References

[1]"Genome Sequence of Vibrio sp. Strain EJY3, an Agarolytic Marine Bacterium Metabolizing 3,6-Anhydro-L-Galactose as a Sole Carbon Source."
Roh H., Yun E.J., Lee S., Ko H.J., Kim S., Kim B.Y., Song H., Lim K.I., Kim K.H., Choi I.G.
J. Bacteriol. 194:2773-2774(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: EJY3 EMBL AEX21689.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003241 Genomic DNA. Translation: AEX21689.1.
RefSeqYP_005022667.1. NC_016613.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX21689; AEX21689; VEJY3_05975.
GeneID11665607.
KEGGvej:VEJY3_05975.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycVSP1116375:GJV8-1239-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2IA85_9VIBR
AccessionPrimary (citable) accession number: H2IA85
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: January 22, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)