H2HGP4 (H2HGP4_CORDJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEX76008.1
EC=5.1.1.1 EMBL AEX76008.1

Gene names

Name:	alr EMBL AEX76008.1
Ordered Locus Names:	CDHC02_0512 EMBL AEX76008.1

Organism

Corynebacterium diphtheriae (strain HC02) [Complete proteome] [HAMAP] EMBL AEX76008.1

Taxonomic identifier

698968 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium › Corynebacterium diphtheriae

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL AEX76008.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2HGP4 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 257C44798CE9AA90	FASTA	382	41,279
	10 20 30 40 50 60 MNLLETRISC DAIAANTRRL KDMVAPAQLM CVVKADGYNH GAPEVATVMA RNGADQFGVA 70 80 90 100 110 120 TLAEAHQLRD AGITLPILCW IWSPEQDFSA AIDRDIDLAA VSMDHVRALI AEAVRRPAGT 130 140 150 160 170 180 RVRVTVKIDT ELHRSGIDEA NWTEAFELLH ACPQVNVTGV FSHLACADDL ESDYTDHQAE 190 200 210 220 230 240 VFRRAIAAGR RVGLDLSVNH LAASPATLTR PDLHFDMVRP GLALYGHEPI AGLDHGLREA 250 260 270 280 290 300 MTWIGSVTVV KPIAAGQGTS YNMTWHAPAD GYLCVVPVGY ADGLPRNVQG HLEVTIAGTR 310 320 330 340 350 360 YPQVGRVCMD QIVVFLGDNS RGVAPGDEAI IFGPRDTQAM TVTELACATG TINYEILCRP 370 380 TGRSHRTYSD LDAVSPTHPT ES

References

[1]

"Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia." Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R. Jr. , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A. J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HC02.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003213 Genomic DNA. Translation: AEX76008.1.
RefSeq	YP_005164299.1. NC_016802.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEX76008; AEX76008; CDHC02_0512.
GeneID	11739482.
KEGG	cde:CDHC02_0512.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

H2HGP4_CORDJ

Accession

Primary (citable) accession number: H2HGP4

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)