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H2H3B3

- H2H3B3_CORDD

UniProt

H2H3B3 - H2H3B3_CORDD

Protein
Submitted name:

Putative glycosilase

Gene

CDCE8392_0478

Organism
Corynebacterium diphtheriae (strain CDCE 8392)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciCDIP698965:GHJP-495-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative glycosilaseImported
    Gene namesi
    Ordered Locus Names:CDCE8392_0478Imported
    OrganismiCorynebacterium diphtheriae (strain CDCE 8392)Imported
    Taxonomic identifieri698965 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
    ProteomesiUP000007156: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK05343.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR022567. DUF3459.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF11941. DUF3459. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H2H3B3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDINRALARN EPICRYFYPH TATPTTPLVI TSYLTTKNTS RELSTIESMT    50
    SKSLPTRTTL SSGTFYQIYP PSFADSNKDG IGDFRGIISR LDYLSDLGIT 100
    GIWLNACFDS PFKDGGYDVR DYTKVASRYG THEDLVELFH QAHARGIAII 150
    LDLVPGHTSE QHPWFQQSAA SKYTDFDDRY IWTSHAFEGG AGLAFIGGEH 200
    PRNGAYIINF FKSQPALNYG FAELTQPWHQ PVDAPGPRAN QDAMVEIMKY 250
    WLSQGADGFR VDMADSLVKN DGTSKRATIG IWQSMLSQVR AEFPNAIFVS 300
    EWGTPTQAFE AGFDADFYLD WRGNGYNLLA RNTDTPLERR DDASFFNSDS 350
    ATGAQEFLDM YLPQWERTHE AGLFSFISGN HDCPRLAPRL NEQERALFFL 400
    FQLTMPGLPF IYYGDEIGLP YAEIPTKEGG YARTGSRTPM CWDSQLPNGG 450
    FSLGDAPLYL PMTDTSQNVA QQRERADSLF HHVQKLIQLR SQLPALDGFA 500
    DLEFDLSLLK KHPKVMVYRR THHGGDSVLI ALNAGNKPIR VELQQSQAHE 550
    LFRCGDVTYP DLSDHSVVEL GPTSGVILSV 580
    Length:580
    Mass (Da):64,990
    Last modified:March 21, 2012 - v1
    Checksum:i0084B52022C53345
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003211 Genomic DNA. Translation: AEX71478.1.
    RefSeqiWP_014306511.1. NC_016785.1.
    YP_005133026.1. NC_016785.1.

    Genome annotation databases

    EnsemblBacteriaiAEX71478; AEX71478; CDCE8392_0478.
    GeneIDi11706924.
    KEGGicdd:CDCE8392_0478.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003211 Genomic DNA. Translation: AEX71478.1 .
    RefSeqi WP_014306511.1. NC_016785.1.
    YP_005133026.1. NC_016785.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEX71478 ; AEX71478 ; CDCE8392_0478 .
    GeneIDi 11706924.
    KEGGi cdd:CDCE8392_0478.

    Phylogenomic databases

    KOi K05343.

    Enzyme and pathway databases

    BioCyci CDIP698965:GHJP-495-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR022567. DUF3459.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF11941. DUF3459. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia."
      Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R. Jr.
      , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A.
      J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CDCE 8392Imported.

    Entry informationi

    Entry nameiH2H3B3_CORDD
    AccessioniPrimary (citable) accession number: H2H3B3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3