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H2GSY1 (H2GSY1_CORDB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CDBH8_0280 EMBL AEX47805.1
OrganismCorynebacterium diphtheriae (strain BH8) [Complete proteome] [HAMAP] EMBL AEX47805.1
Taxonomic identifier698973 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2GSY1 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 9C6A92D15C78EB49

FASTA67874,557
        10         20         30         40         50         60 
MTTTTGALTI TFATTCDGPL AHIPHHLDLN IIHGRIQGTT AHRRIDAEDP DGLDDGLPHH 

        70         80         90        100        110        120 
LCLSVDTTGT HLFIDGYEAF SITQTEWFDT SELTLNPHGN LTIIDHQILN HAPTPRQARN 

       130        140        150        160        170        180 
LAPAAEPLVW FAGSHLSTRD TQRISHLTHG SLRLLMKTRG TGQGGVAFQA HTINGDLTLE 

       190        200        210        220        230        240 
IIDGTLIFSV RCHDEDYVRI TAPGRWDDGH IYDVVIVCGR GATDIYVDGQ QLIHSPGAAF 

       250        260        270        280        290        300 
FNDLSGELSV HIGTSASGVR LFGEVQSGMI YPHVFNHHQV QRLASVEPIA TQALFDCLLD 

       310        320        330        340        350        360 
GAQSYRIPSL ITTDSGVIIA GADKRVSIAN DAPNDIDFVL RRSVDGGRTW QPPRTILQLP 

       370        380        390        400        410        420 
DTACVTDSVL LQDHTTGRIF AFLDQFPAGI GQPNAALGTG FDTDGNRIGH FADGSTCTMP 

       430        440        450        460        470        480 
HEVDQLEASF FGDPHNAPPG TVFQHPSCHL WMLSSDDDGQ TWSTPRDLTP DIKEEWMRFC 

       490        500        510        520        530        540 
GTSPGNGIQL QRGTHAGRLL IPMYYTKGDQ FFAAALYSDD HGHTWHRGES PELEMFESTL 

       550        560        570        580        590        600 
VEANDGSVLL WARNQHPSGA VAHARSTDGG HSWSQVTFNP NVPEIFSQPN ALRVTNPDAI 

       610        620        630        640        650        660 
IFANASQLLP FRGRGVIRMS TNDGTSWQHN RVFNPRHYVY QCMTQLPDGS IGLLWEREMQ 

       670 
GLFFSIIPMT WIMQGYAL 

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References

[1]"Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia."
Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R.Jr. expand/collapse author list , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A.
J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BH8 EMBL AEX47805.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003209 Genomic DNA. Translation: AEX47805.1.
RefSeqYP_005159372.1. NC_016800.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX47805; AEX47805; CDBH8_0280.
GeneID11732967.
KEGGcdb:CDBH8_0280.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Enzyme and pathway databases

BioCycCDIP698973:GHAI-292-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001791. Laminin_G.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF02210. Laminin_G_2. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNetSearch...

Entry information

Entry nameH2GSY1_CORDB
AccessionPrimary (citable) accession number: H2GSY1
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)