H2GMK0 (H2GMK0_CORDB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEX48047.1
EC=5.1.1.1 EMBL AEX48047.1

Gene names

Name:	alr EMBL AEX48047.1
Ordered Locus Names:	CDBH8_0522 EMBL AEX48047.1

Organism

Corynebacterium diphtheriae (strain BH8) [Complete proteome] [HAMAP] EMBL AEX48047.1

Taxonomic identifier

698973 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium › Corynebacterium diphtheriae

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL AEX48047.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2GMK0 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 93EFA1197D046990	FASTA	382	41,355
	10 20 30 40 50 60 MNLLETRISC EAIAANTRRL KDMVAPAQLM CVVKADGYNH GAPEVATVMA RNGADQFGVA 70 80 90 100 110 120 TLAEAHQLRD AGITLPILCW IWSPEQDFSA AIDRDIDLAA VSMEHVRALI AEAMRRPAGT 130 140 150 160 170 180 RVRVTVKIDT ELHRSGIDEA NWTEAFELLH ACPQINVTGV FSHLACADDL ESDYTDHQAE 190 200 210 220 230 240 VFRRAISAGR NVGLDLPVNH LAASPATLTR PDLHFDMVRP GLALYGHEPI AGLDHGLREA 250 260 270 280 290 300 MTWIGSVTVV KPIAAGQGTS YNMTWHAPAD GYLCVVPVGY ADGLPRNVQG HLEVTIAGTR 310 320 330 340 350 360 YPQVGRVCMD QIVVFLGDNS RGVAPGDEAI IFGPRDTQAM TVTELACATG TINYEILCRP 370 380 TGRSHRTYSD FDAVAPTHPT ES

References

[1]

"Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia." Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R. Jr. , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A. J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BH8.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003209 Genomic DNA. Translation: AEX48047.1.
RefSeq	YP_005159614.1. NC_016800.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEX48047; AEX48047; CDBH8_0522.
GeneID	11733152.
KEGG	cdb:CDBH8_0522.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

H2GMK0_CORDB

Accession

Primary (citable) accession number: H2GMK0

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)