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H2GM84 (H2GM84_CORDB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CDBH8_0485 EMBL AEX48010.1
OrganismCorynebacterium diphtheriae (strain BH8) [Complete proteome] [HAMAP] EMBL AEX48010.1
Taxonomic identifier698973 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length580 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2GM84 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 502F1962B2153488

FASTA58065,082
        10         20         30         40         50         60 
MDINRALARN EPICRYFYPH TTTPTTPLVI TSYLTTKNTS RELSTIESMT SKSLPTRTTL 

        70         80         90        100        110        120 
SSGTFYQIYP PSFADSNKDG IGDFRGIISR LDYLSDLGIT GIWLNACFDS PFKDGGYDVR 

       130        140        150        160        170        180 
DYTKVASRYG THEDLVELFH QAHARGIAII LDLVPGHTSE QHPWFQQSAA SKYTDFDDRY 

       190        200        210        220        230        240 
IWTSHAFEGG AGLAFIGGEH PRNGAYIINF FKSQPALNYG FAELTQPWHQ PVDAPGPRAN 

       250        260        270        280        290        300 
QDAMVEIMKY WLSQGADGFR VDMADSLVKN DGTSKRATIG IWQSMLSQVR AEFPNAIFVS 

       310        320        330        340        350        360 
EWGTPTQAFE AGFDADFYLD WRGNGYNLLA RNTDTPLERR DDASFFNSDS ATGAQEFLDM 

       370        380        390        400        410        420 
YLPQWERTHE AGLFSFISGN HDCPRLAPRL NEQERALFFL FQLTMPGLPF IYYGDEIGLP 

       430        440        450        460        470        480 
YAEIPTKEGG YARTGSRTPM CWDSQLPNGG FSLGDAPLYL PMTDTSQNVA QQRERADSLF 

       490        500        510        520        530        540 
HHVQKLIQLR SQLPALDGFA DLEFDLSLLK KHPKVMVYRR THHHGDSVLI ALNAGNKPIR 

       550        560        570        580 
VELQQPQAHE LFRCGDVTYP DLSDHSVVEL GPTSGVILSA 

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References

[1]"Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia."
Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R.Jr. expand/collapse author list , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A.
J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BH8 EMBL AEX48010.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003209 Genomic DNA. Translation: AEX48010.1.
RefSeqYP_005159577.1. NC_016800.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX48010; AEX48010; CDBH8_0485.
GeneID11734813.
KEGGcdb:CDBH8_0485.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Enzyme and pathway databases

BioCycCDIP698973:GHAI-502-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH2GM84_CORDB
AccessionPrimary (citable) accession number: H2GM84
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)