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H2GBE3 (H2GBE3_CORD2) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpi EMBL AEX44303.1
Synonyms:tpiA HAMAP-Rule MF_00147
Ordered Locus Names:CD241_1238 EMBL AEX44303.1
OrganismCorynebacterium diphtheriae (strain 241) [Complete proteome] [HAMAP] EMBL AEX44303.1
Taxonomic identifier698966 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium ›

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1001Electrophile By similarity HAMAP-Rule MF_00147
Active site1721Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site101Substrate By similarity HAMAP-Rule MF_00147
Binding site121Substrate By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
H2GBE3 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 7625A5BC94ADDAB9

FASTA26027,300
        10         20         30         40         50         60 
MARTPLIAGN WKMNLDHLQA VATVQKLAFA LPKEYYEKVD VAVTVPFTDL RSVQTLIEGD 

        70         80         90        100        110        120 
KLAITYGAQD VSQHEAGAYT GEISAQMLAK LGCTWVVVGH SERREYHGES SELVAVKAKA 

       130        140        150        160        170        180 
ALNQGISPIV CVGEPLEIRE AGTHVEYVVE QTRASLAGLT ADDLAKTVIA YEPVWAIGTG 

       190        200        210        220        230        240 
KVASAADAQE VCAAIRNLII ELAGKEVAEG LRILYGGSVK AETVAEIVGQ PDVDGGLVGG 

       250        260 
ASLDGEAFAK LAANAATVVD

« Hide

References

[1]"Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia."
Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R. Jr. expand/collapse author list , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A.
J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 241.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003207 Genomic DNA. Translation: AEX44303.1.
RefSeqYP_005125505.1. NC_016782.1.

3D structure databases

ProteinModelPortalH2GBE3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEX44303; AEX44303; CD241_1238.
GeneID11674151.
KEGGcdp:CD241_1238.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01803.

Enzyme and pathway databases

UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2GBE3_CORD2
AccessionPrimary (citable) accession number: H2GBE3
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info