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H2GAF3

- H2GAF3_CORD2

UniProt

H2GAF3 - H2GAF3_CORD2

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Corynebacterium diphtheriae (strain 241)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:CD241_2205Imported
    OrganismiCorynebacterium diphtheriae (strain 241)Imported
    Taxonomic identifieri698966 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
    ProteomesiUP000007868: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H2GAF3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNTRAVFALS PRSKKLTMLG VGFALASALA ACGSGEQTEN ASMNASASET    50
    SSGEMGTPFA TAKLVTQKGE DAGTVTFTTT QAGTEINVDA KGLEPGFHGF 100
    HVHDKGKCEG DFKSAGGHLS GPDHSHGSDH SGGYHPHAGD LPSLLAAKDG 150
    TAKLTVTTDA LTPELLLGTD GASLIVHEGR DNFANIPERY APEGPDQDTL 200
    KTGDAGARFA CGVIEAK 217
    Length:217
    Mass (Da):22,195
    Last modified:March 21, 2012 - v1
    Checksum:i365851DF520FC27E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003207 Genomic DNA. Translation: AEX45257.1.
    RefSeqiYP_005126459.1. NC_016782.1.

    Genome annotation databases

    EnsemblBacteriaiAEX45257; AEX45257; CD241_2205.
    GeneIDi11672938.
    KEGGicdp:CD241_2205.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003207 Genomic DNA. Translation: AEX45257.1 .
    RefSeqi YP_005126459.1. NC_016782.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEX45257 ; AEX45257 ; CD241_2205 .
    GeneIDi 11672938.
    KEGGi cdp:CD241_2205.

    Phylogenomic databases

    KOi K04565.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia."
      Trost E., Blom J., de Castro Soares S., Huang I.H., Al-Dilaimi A., Schroder J., Jaenicke S., Dorella F.A., Rocha F.S., Miyoshi A., Azevedo V., Schneider M.P., Silva A., Camello T.C., Sabbadini P.S., Santos C.S., Santos L.S., Hirata R. Jr.
      , Mattos-Guaraldi A.L., Efstratiou A., Schmitt M.P., Ton-That H., Tauch A.
      J. Bacteriol. 194:3199-3215(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 241Imported.

    Entry informationi

    Entry nameiH2GAF3_CORD2
    AccessioniPrimary (citable) accession number: H2GAF3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3