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H2FX73

- H2FX73_OCESG

UniProt

H2FX73 - H2FX73_OCESG

Protein
Submitted name:

DNA ligase

Gene

GU3_12250

Organism
Oceanimonas sp. (strain GK1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciOSP511062:GI6E-2539-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:GU3_12250Imported
    OrganismiOceanimonas sp. (strain GK1)Imported
    Taxonomic identifieri511062 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeOceanimonas
    ProteomesiUP000007742: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliH2FX73.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H2FX73-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKPLPLVLPL LWLGVPAPAD AEAPPLQLAA DYAPHHNPAD YLVSEKLDGV    50
    RAYWNGRQLV SRGGHAFSAP DWFVAGFPAT PLDGELWLGR GRFAELSAAV 100
    RRFEPVEDEW REIRFMVFDL PASELPFAAR VAALERLAGT LTTPYLQRVQ 150
    HHALADAAAL AARLDEVESE GGEGLMLRHR QSRYVPERNQ DLLKLKRFQD 200
    AEARVLAQLP GQGRLEGMMG ALLVETVDGR RFKLGTGFSD EQRRHPPAPG 250
    TLVTYRYRGE TATGLPRFAS FWRVRDETP 279
    Length:279
    Mass (Da):31,123
    Last modified:March 21, 2012 - v1
    Checksum:iA720FF3B5A5990D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003171 Genomic DNA. Translation: AEY02205.1.
    RefSeqiWP_014292916.1. NC_016745.1.
    YP_005092955.1. NC_016745.1.

    Genome annotation databases

    EnsemblBacteriaiAEY02205; AEY02205; GU3_12250.
    GeneIDi11598335.
    KEGGioce:GU3_12250.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003171 Genomic DNA. Translation: AEY02205.1 .
    RefSeqi WP_014292916.1. NC_016745.1.
    YP_005092955.1. NC_016745.1.

    3D structure databases

    ProteinModelPortali H2FX73.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEY02205 ; AEY02205 ; GU3_12250 .
    GeneIDi 11598335.
    KEGGi oce:GU3_12250.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.

    Enzyme and pathway databases

    BioCyci OSP511062:GI6E-2539-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Oceanimonas sp. GK1, a halotolerant bacterium from Gavkhouni Wetland in Iran."
      Parsa Yeganeh L., Azarbaijani R., Sarikhan S., Mousavi H., Ramezani M., Amoozegar M.A., Shahzadeh Fazeli A., Salekdeh G.H.
      J. Bacteriol. 194:2123-2124(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GK1Imported.

    Entry informationi

    Entry nameiH2FX73_OCESG
    AccessioniPrimary (citable) accession number: H2FX73
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3