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Protein

RNA polymerase II transcription factor B subunit 2

Gene

KAFR0H02850

Organism
Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) (Yeast) (Kluyveromyces africanus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
Name:KAFR0H02850Imported
ORF Names:KAFR_0H02850Imported
OrganismiKazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) (Yeast) (Kluyveromyces africanus)Imported
Taxonomic identifieri1071382 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeKazachstania
Proteomesi
  • UP000005220 Componenti: Chromosome 8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

InParanoidiH2AZD8.
KOiK03144.
OrthoDBiEOG092C3703.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.
TIGRFAMsiTIGR00625. tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

H2AZD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSDLLRHTV NQYLEELPQQ VQTRLYESPA TCLAIYRLLP QLSKFFVMAM
60 70 80 90 100
VFNENDVSLR DLDRWVKTNG KLQFQEAIKS MKSLHLIIPS KGNGTLMISL
110 120 130 140 150
NPTFKESFRN ALTGGEINNS FGIVVDNEAE QSRITLNFLD EYSANKWETI
160 170 180 190 200
LHFMVGTPLA NIPSHNVLNL LKNSRLMEEA DKTGTLKITN EGFQFLLQEI
210 220 230 240 250
NSQIWTLLLQ YLKMSESLQM DPVEVLNFIF MLGALEIGKA YSIDGLTETQ
260 270 280 290 300
KTMLRDFRDY GIIFQKNLTS KSFYPTNLAI MLTSDTRSIL RTASGAMDSV
310 320 330 340 350
LRQNKEDSKK QTSGDNVTED TANDIEQIGL ENQEGRDGSL IIETNFKLYS
360 370 380 390 400
YSNSPLQIAI LSLFVHLKSR FVNMVTGQIT RESIRRALVN GITADQIIAY
410 420 430 440 450
LETHAHPRMR RLAEEKLEKK LELDPNSKDT LQILPPTVVD QIKLWQLELD
460 470 480 490 500
RVITYDGSLY SDFENSTEYN MLSKYAQDIG VLIWKDDKKR KFFVSKEGNT
510
QVLDYAKRKL KKKA
Length:514
Mass (Da):58,853
Last modified:March 21, 2012 - v1
Checksum:i7AB26077E26DE105
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE650828 Genomic DNA. Translation: CCF59694.1.
RefSeqiXP_003958829.1. XM_003958780.1.

Genome annotation databases

EnsemblFungiiCCF59694; CCF59694; KAFR_0H02850.
GeneIDi13887690.
KEGGikaf:KAFR_0H02850.

Entry informationi

Entry nameiH2AZD8_KAZAF
AccessioniPrimary (citable) accession number: H2AZD8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 7, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported