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H2AHS9

- H2AHS9_BACAM

UniProt

H2AHS9 - H2AHS9_BACAM

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
ligD, BACAU_1295
Organism
Bacillus amyloliquefaciens subsp. plantarum CAU B946
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBAMY1114958:GJW0-1386-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligDImported
ORF Names:BACAU_1295Imported
OrganismiBacillus amyloliquefaciens subsp. plantarum CAU B946Imported
Taxonomic identifieri1114958 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000008361: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2AHS9-1 [UniParc]FASTAAdd to Basket

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MQPILTSVPP EGSEWRYEVK YDGFRCLLRI DENGVTLTSR NGQTLTNQFP    50
EITAFAARCF QHMKDRFPIT LDGELVYLIN PYRADFEHLQ IRGRLKRTEA 100
IKSTAERRPC RFLAFDLLVL EGAGTVSLPY VKRKRALSNL LKEANLPVCP 150
HHLAEEAIQY IPEHTDFDAL WDKVVRYDGE GIVAKRASSG WAENKRSPDW 200
QKYKHMKTAH VLLTGFNPKN GYVTASVLKD GIVVPIASVS HGMQAEEKNA 250
VRTIMETHGK KQKSGEYTLE PSICMTVQYL TILQDTLREV SFVSFQFEMD 300
WTECTYQQLI LRSKTLPPKL QFTSLDKIVF KKREKTKADF LSYMVKMSDF 350
LMPFLKDRAV TVIRYPHGAP GESFFQKNKP DYTPDFVSSV FDGSHEHIVC 400
SSIPSLLWLA NQLALEFHVP FQTVHSERPA EIVIDLDPPS RNDFPMAVEA 450
AHVLKQLFDS FSMTSFPKLS GNKGIQLYIP LSPEAFTYEE TRAFTMLIAD 500
YCVRTRPDLF TTERFIKNRN GRLYLDYLQH AEGKTIIAPY STRGNELGTV 550
AAPLYWSEVN SSLTPDDYTI DTVVNRVRTE GDPFYDFYRN PQDGPLSIVL 600
EQIKRKS 607
Length:607
Mass (Da):69,529
Last modified:March 21, 2012 - v1
Checksum:i2942ADA1466D5EBE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE617159 Genomic DNA. Translation: CCF04829.1.
RefSeqiYP_005130024.1. NC_016784.1.

Genome annotation databases

EnsemblBacteriaiCCF04829; CCF04829; BACAU_1295.
GeneIDi11698460.
KEGGibaq:BACAU_1295.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE617159 Genomic DNA. Translation: CCF04829.1 .
RefSeqi YP_005130024.1. NC_016784.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCF04829 ; CCF04829 ; BACAU_1295 .
GeneIDi 11698460.
KEGGi baq:BACAU_1295.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BAMY1114958:GJW0-1386-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A."
    Blom J., Rueckert C., Niu B., Wang Q., Borriss R.
    J. Bacteriol. 194:1845-1846(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CAU B946Imported.

Entry informationi

Entry nameiH2AHS9_BACAM
AccessioniPrimary (citable) accession number: H2AHS9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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