H2AHS9 (H2AHS9_BACAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL CCF04829.1
EC=6.5.1.1 EMBL CCF04829.1

Gene names

Name:	ligD EMBL CCF04829.1
ORF Names:	BACAU_1295 EMBL CCF04829.1

Organism

Bacillus amyloliquefaciens subsp. plantarum CAU B946 EMBL CCF04829.1

Taxonomic identifier

1114958 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus amyloliquefaciens › Bacillus amyloliquefaciens subsp. plantarum

Protein attributes

Sequence length	607 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CCF04829.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H2AHS9 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 2942ADA1466D5EBE	FASTA	607	69,529
	10 20 30 40 50 60 MQPILTSVPP EGSEWRYEVK YDGFRCLLRI DENGVTLTSR NGQTLTNQFP EITAFAARCF 70 80 90 100 110 120 QHMKDRFPIT LDGELVYLIN PYRADFEHLQ IRGRLKRTEA IKSTAERRPC RFLAFDLLVL 130 140 150 160 170 180 EGAGTVSLPY VKRKRALSNL LKEANLPVCP HHLAEEAIQY IPEHTDFDAL WDKVVRYDGE 190 200 210 220 230 240 GIVAKRASSG WAENKRSPDW QKYKHMKTAH VLLTGFNPKN GYVTASVLKD GIVVPIASVS 250 260 270 280 290 300 HGMQAEEKNA VRTIMETHGK KQKSGEYTLE PSICMTVQYL TILQDTLREV SFVSFQFEMD 310 320 330 340 350 360 WTECTYQQLI LRSKTLPPKL QFTSLDKIVF KKREKTKADF LSYMVKMSDF LMPFLKDRAV 370 380 390 400 410 420 TVIRYPHGAP GESFFQKNKP DYTPDFVSSV FDGSHEHIVC SSIPSLLWLA NQLALEFHVP 430 440 450 460 470 480 FQTVHSERPA EIVIDLDPPS RNDFPMAVEA AHVLKQLFDS FSMTSFPKLS GNKGIQLYIP 490 500 510 520 530 540 LSPEAFTYEE TRAFTMLIAD YCVRTRPDLF TTERFIKNRN GRLYLDYLQH AEGKTIIAPY 550 560 570 580 590 600 STRGNELGTV AAPLYWSEVN SSLTPDDYTI DTVVNRVRTE GDPFYDFYRN PQDGPLSIVL EQIKRKS

References

[1]

"The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A." Blom J., Rueckert C., Niu B., Wang Q., Borriss R. J. Bacteriol. 194:1845-1846(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CAU B946 EMBL CCF04829.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE617159 Genomic DNA. Translation: CCF04829.1.
RefSeq	YP_005130024.1. NC_016784.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCF04829; CCF04829; BACAU_1295.
GeneID	11698460.
KEGG	baq:BACAU_1295.
Phylogenomic databases
KO	K01971.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR014146. DNA_pol_LigD_ligase_dom. IPR014145. LigD_pol. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H2AHS9_BACAM

Accession

Primary (citable) accession number: H2AHS9

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)