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H2AHS9 (H2AHS9_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length607 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCF04829.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H2AHS9 [UniParc].

Last modified March 21, 2012. Version 1.
Checksum: 2942ADA1466D5EBE

FASTA60769,529
        10         20         30         40         50         60 
MQPILTSVPP EGSEWRYEVK YDGFRCLLRI DENGVTLTSR NGQTLTNQFP EITAFAARCF 

        70         80         90        100        110        120 
QHMKDRFPIT LDGELVYLIN PYRADFEHLQ IRGRLKRTEA IKSTAERRPC RFLAFDLLVL 

       130        140        150        160        170        180 
EGAGTVSLPY VKRKRALSNL LKEANLPVCP HHLAEEAIQY IPEHTDFDAL WDKVVRYDGE 

       190        200        210        220        230        240 
GIVAKRASSG WAENKRSPDW QKYKHMKTAH VLLTGFNPKN GYVTASVLKD GIVVPIASVS 

       250        260        270        280        290        300 
HGMQAEEKNA VRTIMETHGK KQKSGEYTLE PSICMTVQYL TILQDTLREV SFVSFQFEMD 

       310        320        330        340        350        360 
WTECTYQQLI LRSKTLPPKL QFTSLDKIVF KKREKTKADF LSYMVKMSDF LMPFLKDRAV 

       370        380        390        400        410        420 
TVIRYPHGAP GESFFQKNKP DYTPDFVSSV FDGSHEHIVC SSIPSLLWLA NQLALEFHVP 

       430        440        450        460        470        480 
FQTVHSERPA EIVIDLDPPS RNDFPMAVEA AHVLKQLFDS FSMTSFPKLS GNKGIQLYIP 

       490        500        510        520        530        540 
LSPEAFTYEE TRAFTMLIAD YCVRTRPDLF TTERFIKNRN GRLYLDYLQH AEGKTIIAPY 

       550        560        570        580        590        600 
STRGNELGTV AAPLYWSEVN SSLTPDDYTI DTVVNRVRTE GDPFYDFYRN PQDGPLSIVL 


EQIKRKS 

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References

[1]"The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A."
Blom J., Rueckert C., Niu B., Wang Q., Borriss R.
J. Bacteriol. 194:1845-1846(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CAU B946 EMBL CCF04829.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE617159 Genomic DNA. Translation: CCF04829.1.
RefSeqYP_005130024.1. NC_016784.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCF04829; CCF04829; BACAU_1295.
GeneID11698460.
KEGGbaq:BACAU_1295.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBAMY1114958:GJW0-1386-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH2AHS9_BACAM
AccessionPrimary (citable) accession number: H2AHS9
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)