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H2AHS9

- H2AHS9_BACAM

UniProt

H2AHS9 - H2AHS9_BACAM

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligD

Organism
Bacillus amyloliquefaciens subsp. plantarum CAU B946
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBAMY1114958:GJW0-1386-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligDImported
ORF Names:BACAU_1295Imported
OrganismiBacillus amyloliquefaciens subsp. plantarum CAU B946Imported
Taxonomic identifieri1114958 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000008361: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2AHS9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQPILTSVPP EGSEWRYEVK YDGFRCLLRI DENGVTLTSR NGQTLTNQFP
60 70 80 90 100
EITAFAARCF QHMKDRFPIT LDGELVYLIN PYRADFEHLQ IRGRLKRTEA
110 120 130 140 150
IKSTAERRPC RFLAFDLLVL EGAGTVSLPY VKRKRALSNL LKEANLPVCP
160 170 180 190 200
HHLAEEAIQY IPEHTDFDAL WDKVVRYDGE GIVAKRASSG WAENKRSPDW
210 220 230 240 250
QKYKHMKTAH VLLTGFNPKN GYVTASVLKD GIVVPIASVS HGMQAEEKNA
260 270 280 290 300
VRTIMETHGK KQKSGEYTLE PSICMTVQYL TILQDTLREV SFVSFQFEMD
310 320 330 340 350
WTECTYQQLI LRSKTLPPKL QFTSLDKIVF KKREKTKADF LSYMVKMSDF
360 370 380 390 400
LMPFLKDRAV TVIRYPHGAP GESFFQKNKP DYTPDFVSSV FDGSHEHIVC
410 420 430 440 450
SSIPSLLWLA NQLALEFHVP FQTVHSERPA EIVIDLDPPS RNDFPMAVEA
460 470 480 490 500
AHVLKQLFDS FSMTSFPKLS GNKGIQLYIP LSPEAFTYEE TRAFTMLIAD
510 520 530 540 550
YCVRTRPDLF TTERFIKNRN GRLYLDYLQH AEGKTIIAPY STRGNELGTV
560 570 580 590 600
AAPLYWSEVN SSLTPDDYTI DTVVNRVRTE GDPFYDFYRN PQDGPLSIVL

EQIKRKS
Length:607
Mass (Da):69,529
Last modified:March 21, 2012 - v1
Checksum:i2942ADA1466D5EBE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE617159 Genomic DNA. Translation: CCF04829.1.
RefSeqiYP_005130024.1. NC_016784.1.

Genome annotation databases

EnsemblBacteriaiCCF04829; CCF04829; BACAU_1295.
GeneIDi11698460.
KEGGibaq:BACAU_1295.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE617159 Genomic DNA. Translation: CCF04829.1 .
RefSeqi YP_005130024.1. NC_016784.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCF04829 ; CCF04829 ; BACAU_1295 .
GeneIDi 11698460.
KEGGi baq:BACAU_1295.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BAMY1114958:GJW0-1386-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A."
    Blom J., Rueckert C., Niu B., Wang Q., Borriss R.
    J. Bacteriol. 194:1845-1846(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CAU B946Imported.

Entry informationi

Entry nameiH2AHS9_BACAM
AccessioniPrimary (citable) accession number: H2AHS9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3