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H0YVP7

- H0YVP7_TAEGU

UniProt

H0YVP7 - H0YVP7_TAEGU

Protein
Submitted name:

Uncharacterized protein

Gene

F13A1

Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei321 – 3211UniRule annotation
    Active sitei321 – 3211 By similarity
    Active sitei380 – 3801UniRule annotation
    Active sitei380 – 3801 By similarity
    Active sitei403 – 4031UniRule annotation
    Metal bindingi443 – 4431Calcium
    Metal bindingi445 – 4451Calcium
    Metal bindingi492 – 4921Calcium
    Metal bindingi497 – 4971Calcium

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: Ensembl

    GO - Biological processi

    1. blood coagulation Source: Ensembl
    2. peptide cross-linking Source: Ensembl

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:F13A1Imported
    OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
    Taxonomic identifieri59729 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
    ProteomesiUP000007754: Chromosome 2

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115156.
    KOiK03917.
    OMAiCEEDAVY.
    OrthoDBiEOG7WT40M.
    TreeFamiTF324278.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H0YVP7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSETTSTNVE NKHLLNGRRA IPLNYSNDEE NEVPEMEAFG LIPRGFNPRD    50
    YLSVVDIYMF KEPHEINKQE HHTDKYYNPK LIVRRGQAFQ IQIDFNRPYK 100
    PESDQFWLEF LMGRYPQQNK GTYIPILVGN VLKPGQWGAK IIHRENNSIR 150
    LSIMSSTTCI IGKFRFYVAV MTPFGILRTR RNSATDTYIL FNPWCQLDAV 200
    YLDDEKEREE YVLNDVGIVF HGNVEDVKSR SWSYGQFEEN VLDACLFLMD 250
    KAELELSGRG NPIKICRVAS AVINSRDDNG VIAGSWNNTY DYGVAPSAWT 300
    GSVDILLEYY SSKQPVRYGQ CWVFAGVFNT FLRCLGIPAR LITNYSSAHD 350
    NNANLRMDFF LDDEGKVDTR LTKDSVWNYH CWNEAWMTRP DLPVGFGGWQ 400
    VVDGTPQETS DGMYRCGPAS VQAIKHGHVC FQFDAPFVYA EVNSDIFYTR 450
    MEKNGTQVVE NIDTTHIGQL IVTKAVGGDG MVDITEQYKF REGSDEERLA 500
    LETAVMYGVK KQSIQDTTYQ PQTDVDMDFQ VQKAVLGNDF KVTITFRNKS 550
    RNSYTATTYF SGNIVFYTGV TKTEFKKHSF SAKLEPSSSS SFDIVIKSSE 600
    YMSDLLEQAS FHFFVTARIN ETGKILAVQK AIMLEIPTLR IKTKGELVAG 650
    KETSVIVEFT NPLKQTLENV MLRLEGPGVL RTIKKQFGRI PMNSTLTWEV 700
    KFTPMRPGLQ KLIASLNSDA LRHVYGELNI QIRKP 735
    Length:735
    Mass (Da):83,812
    Last modified:February 22, 2012 - v1
    Checksum:iB4380C64A54DA3FD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABQF01009197 Genomic DNA. No translation available.
    RefSeqiXP_002199785.1. XM_002199749.2.

    Genome annotation databases

    EnsembliENSTGUT00000002389; ENSTGUP00000002368; ENSTGUG00000002276.
    GeneIDi100228667.
    KEGGitgu:100228667.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABQF01009197 Genomic DNA. No translation available.
    RefSeqi XP_002199785.1. XM_002199749.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSTGUT00000002389 ; ENSTGUP00000002368 ; ENSTGUG00000002276 .
    GeneIDi 100228667.
    KEGGi tgu:100228667.

    Organism-specific databases

    CTDi 2162.

    Phylogenomic databases

    GeneTreei ENSGT00740000115156.
    KOi K03917.
    OMAi CEEDAVY.
    OrthoDBi EOG7WT40M.
    TreeFami TF324278.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of a songbird."
      Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W., Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A., Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P., Velho T.A.
      , Ferris M., Balakrishnan C.N., Sinha S., Blatti C., London S.E., Li Y., Lin Y.C., George J., Sweedler J., Southey B., Gunaratne P., Watson M., Nam K., Backstrom N., Smeds L., Nabholz B., Itoh Y., Whitney O., Pfenning A.R., Howard J., Volker M., Skinner B.M., Griffin D.K., Ye L., McLaren W.M., Flicek P., Quesada V., Velasco G., Lopez-Otin C., Puente X.S., Olender T., Lancet D., Smit A.F., Hubley R., Konkel M.K., Walker J.A., Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z., Eichler E.E., Stapley J., Slate J., Ekblom R., Birkhead T., Burke T., Burt D., Scharff C., Adam I., Richard H., Sultan M., Soldatov A., Lehrach H., Edwards S.V., Yang S.P., Li X., Graves T., Fulton L., Nelson J., Chinwalla A., Hou S., Mardis E.R., Wilson R.K.
      Nature 464:757-762(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JAN-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiH0YVP7_TAEGU
    AccessioniPrimary (citable) accession number: H0YVP7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3