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Protein
Submitted name:

Cytoplasmic FMR1-interacting protein 1

Gene

CYFIP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic FMR1-interacting protein 1Imported
Gene namesi
Name:CYFIP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

HGNCiHGNC:13759. CYFIP1.

PTM / Processingi

Proteomic databases

EPDiH0YL50.
PaxDbiH0YL50.
PeptideAtlasiH0YL50.
PRIDEiH0YL50.

Expressioni

Gene expression databases

BgeeiH0YL50.
ExpressionAtlasiH0YL50. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000324549.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3534. Eukaryota.
ENOG410XPKW. LUCA.
GeneTreeiENSGT00500000044831.

Family and domain databases

InterProiIPR008081. Cytoplasmic_FMR1-int.
[Graphical view]
PANTHERiPTHR12195. PTHR12195. 1 hit.
PfamiPF05994. FragX_IP. 1 hit.
[Graphical view]
PIRSFiPIRSF008153. FMR1_interacting. 1 hit.
PRINTSiPR01698. CYTOFMRPINTP.

Sequencei

Sequence statusi: Fragment.

H0YL50-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PFQNILPRVH VKEGERLDAK MKRLESKYAP LHLVPLIERL GTPQQIAIAR
60 70 80 90 100
EGDLLTKERL CCGLSMFEVI LTRIRSFLDD PIWRGPLPSN GVMHVDECVE
110 120 130 140 150
FHRLWSAMQF VYCIPVGTHE FTVEQCFGDG LHWAGCMIIV LLGQQRRFAV
160 170
LDFCYHLLKV QKHDGKDEII KNVVCG
Length:176
Mass (Da):20,225
Last modified:February 22, 2012 - v1
Checksum:i87923832757609D3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011767 Genomic DNA. No translation available.
AC090764 Genomic DNA. No translation available.
KF456021 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000561263; ENSP00000453060; ENSG00000273749.
UCSCiuc059grt.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011767 Genomic DNA. No translation available.
AC090764 Genomic DNA. No translation available.
KF456021 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000324549.

Proteomic databases

EPDiH0YL50.
PaxDbiH0YL50.
PeptideAtlasiH0YL50.
PRIDEiH0YL50.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000561263; ENSP00000453060; ENSG00000273749.
UCSCiuc059grt.1. human.

Organism-specific databases

HGNCiHGNC:13759. CYFIP1.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3534. Eukaryota.
ENOG410XPKW. LUCA.
GeneTreeiENSGT00500000044831.

Miscellaneous databases

ChiTaRSiCYFIP1. human.

Gene expression databases

BgeeiH0YL50.
ExpressionAtlasiH0YL50. baseline and differential.

Family and domain databases

InterProiIPR008081. Cytoplasmic_FMR1-int.
[Graphical view]
PANTHERiPTHR12195. PTHR12195. 1 hit.
PfamiPF05994. FragX_IP. 1 hit.
[Graphical view]
PIRSFiPIRSF008153. FMR1_interacting. 1 hit.
PRINTSiPR01698. CYTOFMRPINTP.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the DNA sequence and duplication history of human chromosome 15."
    Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A.
    , Arachchi H.M., Baradarani L., Birditt B., Bloom S., Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K., DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R., Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G., Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A., Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W., Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X., Sneddon K.M., Stewart S., Sougnez C., Stone S.M., Topham K., Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S., Nusbaum C.
    Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (JAN-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH0YL50_HUMAN
AccessioniPrimary (citable) accession number: H0YL50
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: July 6, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.