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Protein
Submitted name:

CD44 antigen

Gene

CD44

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CD44 antigenImported
Gene namesi
Name:CD44Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000026508.16.
HGNCiHGNC:1681. CD44.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei150 – 171HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000026508.

PTM / Processingi

Proteomic databases

PeptideAtlasiH0YF08.
PRIDEiH0YF08.

Expressioni

Gene expression databases

BgeeiENSG00000026508.
ExpressionAtlasiH0YF08. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliH0YF08.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IZCP. Eukaryota.
ENOG4111S6T. LUCA.
GeneTreeiENSGT00530000063822.

Family and domain databases

InterProiView protein in InterPro
IPR001231. CD44_antigen.
PANTHERiPTHR10225:SF6. PTHR10225:SF6. 1 hit.
PRINTSiPR00658. CD44.

Sequencei

Sequence statusi: Fragment.

H0YF08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RTNPEDIYPS NPTDDDVSSG SSSERSSTSG GYIFYTFSTV HPIPDEDSPW
60 70 80 90 100
ITDSTDRIPA TSTSSNTISA GWEPNEENED ERDRHLSFSG SGIDDDEDFI
110 120 130 140 150
SSTRDQDTFH PSGGSHTTHG SESDGHSHGS QEGGANTTSG PIRTPQIPEW
160 170 180
LIILASLLAL ALILAVCIAV NSRRRCGQKK KLVINS
Length:186
Mass (Da):20,065
Last modified:October 5, 2016 - v8
Checksum:iD39A0D2C52DACFB7
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei186Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133330 Genomic DNA. No translation available.
AL136989 Genomic DNA. No translation available.
AL356215 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000525688; ENSP00000436980; ENSG00000026508.
UCSCiuc058aja.1. human.

Similar proteinsi

Entry informationi

Entry nameiH0YF08_HUMAN
AccessioniPrimary (citable) accession number: H0YF08
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: October 5, 2016
Last modified: January 31, 2018
This is version 40 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported