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H0YBY2

- H0YBY2_HUMAN

UniProt

H0YBY2 - H0YBY2_HUMAN

Protein
Submitted name:

Macrophage scavenger receptor types I and II

Gene

MSR1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. scavenger receptor activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Macrophage scavenger receptor types I and IIImported
    Gene namesi
    Name:MSR1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 8

    Organism-specific databases

    HGNCiHGNC:7376. MSR1.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Expressioni

    Gene expression databases

    ArrayExpressiH0YBY2.
    BgeeiH0YBY2.

    Structurei

    3D structure databases

    ProteinModelPortaliH0YBY2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OMAiKVFAISK.

    Family and domain databases

    InterProiIPR008160. Collagen.
    IPR003543. Macro_scav_rcpt.
    [Graphical view]
    PfamiPF01391. Collagen. 1 hit.
    [Graphical view]
    PRINTSiPR01408. MACSCAVRCPTR.

    Sequencei

    Sequence statusi: Fragment.

    H0YBY2-1 [UniParc]FASTAAdd to Basket

    « Hide

    EISKLEERVY NVSAEIMAMK EEQVHLEQEI KGEVKVLNNI TNDLRLKDWE    50
    HSQTLRNITL IQGPPGPPGE KGDRGPTGES GPRGFPGPIG PPGLKGDRGA 100
    IGFPGSRGLP GYAGRPGNSG PKGQKGEKGS GNTLKSRNLT TRKVFAISK 149
    Length:149
    Mass (Da):15,920
    Last modified:February 22, 2012 - v1
    Checksum:i4F4E610ABAE2BAE2
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC010785 Genomic DNA. No translation available.
    AC023396 Genomic DNA. No translation available.
    AC087360 Genomic DNA. No translation available.
    AC091162 Genomic DNA. No translation available.
    AC145059 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000522672; ENSP00000430536; ENSG00000038945.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC010785 Genomic DNA. No translation available.
    AC023396 Genomic DNA. No translation available.
    AC087360 Genomic DNA. No translation available.
    AC091162 Genomic DNA. No translation available.
    AC145059 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali H0YBY2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000522672 ; ENSP00000430536 ; ENSG00000038945 .

    Organism-specific databases

    HGNCi HGNC:7376. MSR1.
    GenAtlasi Search...

    Phylogenomic databases

    OMAi KVFAISK.

    Miscellaneous databases

    NextBioi 35521561.

    Gene expression databases

    ArrayExpressi H0YBY2.
    Bgeei H0YBY2.

    Family and domain databases

    InterProi IPR008160. Collagen.
    IPR003543. Macro_scav_rcpt.
    [Graphical view ]
    Pfami PF01391. Collagen. 1 hit.
    [Graphical view ]
    PRINTSi PR01408. MACSCAVRCPTR.
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of human chromosome 8."
      Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
      , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
      Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (JAN-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiH0YBY2_HUMAN
    AccessioniPrimary (citable) accession number: H0YBY2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3