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Protein
Submitted name:

Collagen alpha-1(XVII) chain

Gene

COL17A1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Collagen alpha-1(XVII) chainImported
Gene namesi
Name:COL17A1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 10

Organism-specific databases

EuPathDBiHostDB:ENSG00000065618.16.
HGNCiHGNC:2194. COL17A1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000065618.

PTM / Processingi

Proteomic databases

PaxDbiH0Y420.
PRIDEiH0Y420.

Expressioni

Gene expression databases

BgeeiENSG00000065618.
ExpressionAtlasiH0Y420. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliH0Y420.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3544. Eukaryota.
ENOG41103C3. LUCA.
GeneTreeiENSGT00820000126981.

Family and domain databases

InterProiView protein in InterPro
IPR008160. Collagen.
PfamiView protein in Pfam
PF01391. Collagen. 1 hit.

Sequencei

Sequence statusi: Fragment.

H0Y420-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XYGAIQGPPG QKGEMGTPGP KGDRGPAGPP GHPGPPGPRG HKGEKGDKGD
60
QVYAGRRRRR SIAVKP
Length:66
Mass (Da):6,744
Last modified:February 22, 2012 - v1
Checksum:i48092C595841D648
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL138761 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000433822; ENSP00000388832; ENSG00000065618.
UCSCiuc001kxq.4. human.

Entry informationi

Entry nameiH0Y420_HUMAN
AccessioniPrimary (citable) accession number: H0Y420
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 27, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported