Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Nectin cell adhesion molecule 3

Gene

NECTIN3

Organism
Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nectin cell adhesion molecule 3Imported
Gene namesi
Name:NECTIN3Imported
OrganismiOtolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)Imported
Taxonomic identifieri30611 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesStrepsirrhiniLorisiformesGalagidaeOtolemur
Proteomesi
  • UP000005225 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei405 – 428HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi30611.ENSOGAP00000007969.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 165Ig-likeInterPro annotationAdd BLAST107
Domaini170 – 258Ig-likeInterPro annotationAdd BLAST89
Domaini269 – 354Ig-likeInterPro annotationAdd BLAST86

Keywords - Domaini

Immunoglobulin domainSAAS annotation, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IGR7. Eukaryota.
ENOG410ZRVN. LUCA.
GeneTreeiENSGT00900000140811.
InParanoidiH0WZF2.
OMAiTITQVSW.
OrthoDBiEOG091G0BLQ.
TreeFamiTF331051.

Family and domain databases

Gene3Di1.20.5.100. 1 hit.
2.60.40.10. 4 hits.
InterProiView protein in InterPro
IPR013162. CD80_C2-set.
IPR021157. Cyt_c1_TM_anchor_C.
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
IPR033319. Nectin-3.
PANTHERiPTHR23277:SF12. PTHR23277:SF12. 1 hit.
PfamiView protein in Pfam
PF08205. C2-set_2. 1 hit.
PF07686. V-set. 1 hit.
SMARTiView protein in SMART
SM00409. IG. 1 hit.
SUPFAMiSSF48726. SSF48726. 3 hits.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 3 hits.

Sequencei

Sequence statusi: Complete.

H0WZF2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARTPGPAPL CPGGGKAQLS SASPPGAGLL LPPPTPPPLL LLLFPLLLFS
60 70 80 90 100
RLCGALAGPI IVEPHVTAIW GKNVSLKCLI EVNETITQIS WEKIHGKSSQ
110 120 130 140 150
TVAVHHPQYG FSVQGEYQGR VLFKNYSLND ATITLHNIGF SDSGKYICKA
160 170 180 190 200
VTFPLGNAQS STTVTVLVEP TVSLIKGADS LIDGGNETVA AICIAATGKP
210 220 230 240 250
VARIDWEGDL GKMESTTTSF PNETATIVSQ YKLFPTRFAR GRRITCVVKH
260 270 280 290 300
PALEKDIRYS FILDIQYAPE VSITGYDGNW FVGRKGVNLK CNADANPPPF
310 320 330 340 350
KSVWSRLDGQ WPDGLLASDS TLHFVYPLTF NYSGVYICRV TNSLGQRSDQ
360 370 380 390 400
KVIYISDPPT TTTLQPTIQW RPSTADIEDL ATEHKKLPFP LSTLATIKDD
410 420 430 440 450
TIGTIIASVV GGALFIVLVS VLAGIFCYRR RRTFRGDYFA KNYIPPSDMQ
460 470 480 490 500
KESQIDVLQQ DELDSYPDSV KKENKNPVNN LIRKDYLEEP EKTQWNNVEN
510 520 530 540
LNRFERPMDY YENLKMGMKF VNDEHYDENE DDLVSHVDGS VISRREWYV
Length:549
Mass (Da):60,912
Last modified:February 22, 2012 - v1
Checksum:iBD591D1E7CCF93E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQR03138385 Genomic DNA. No translation available.
AAQR03138386 Genomic DNA. No translation available.
AAQR03138387 Genomic DNA. No translation available.
AAQR03138388 Genomic DNA. No translation available.
AAQR03138389 Genomic DNA. No translation available.
RefSeqiXP_003797730.1. XM_003797682.2.

Genome annotation databases

EnsembliENSOGAT00000008892; ENSOGAP00000007969; ENSOGAG00000008891.
GeneIDi100951380.

Similar proteinsi

Entry informationi

Entry nameiH0WZF2_OTOGA
AccessioniPrimary (citable) accession number: H0WZF2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 25, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported