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Protein

POU domain protein

Gene

POU1F1

Organism
Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi254 – 313HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
POU domain proteinUniRule annotation
Gene namesi
Name:POU1F1Imported
OrganismiOtolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)Imported
Taxonomic identifieri30611 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesStrepsirrhiniLorisiformesGalagidaeOtolemur
Proteomesi
  • UP000005225 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi30611.ENSOGAP00000004084.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini164 – 238POU-specificInterPro annotationAdd BLAST75
Domaini252 – 312HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the POU transcription factor family.UniRule annotationSAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3802. Eukaryota.
ENOG410XQ7X. LUCA.
GeneTreeiENSGT00760000118935.
InParanoidiH0WQ72.
OMAiMSCQPFT.
OrthoDBiEOG091G0U0S.
TreeFamiTF316413.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR010982. Lambda_DNA-bd_dom_sf.
IPR015586. Pit_1.
IPR013847. POU.
IPR000327. POU_dom.
PANTHERiPTHR11636:SF84. PTHR11636:SF84. 2 hits.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
PRINTSiPR00028. POUDOMAIN.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.

Sequencei

Sequence statusi: Complete.

H0WQ72-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GERRFSLFVC SIVGMSCQSF TSADTFIPLN SDASATLPLI MHHSAAECLP
60 70 80 90 100
VSNHATNVMS TVLSILSLIQ TLKCLRTLSS AKTLGNAATG LHYSVPSCHY
110 120 130 140 150
GNQPSTYGVM AGGLTPCLYK FPDHTLGHGF PPIHQPLLAE DPTAAEFKQE
160 170 180 190 200
LRRKSKLVEE PIDMDSPEIR ELEKFANEFK VRRIKLGYTQ TNVGEALAAV
210 220 230 240 250
HGSEFSQTTI CRFENLQLSF KNACKLKAIL SKWLDEAEQV GALYNEKVGA
260 270 280 290 300
NERKRKRRTT ISIAAKDALE RHFGEQNKPS SQEIVRMAEE LNLEKEVVRV
310 320 330
WFCNRRQREK RVKTSLNQSL FSISKEHLEC R
Length:331
Mass (Da):37,115
Last modified:February 22, 2012 - v1
Checksum:i8F9DCE6F8AEE6A0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQR03021858 Genomic DNA. No translation available.
AAQR03021859 Genomic DNA. No translation available.
AAQR03021860 Genomic DNA. No translation available.
AAQR03021861 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSOGAT00000004580; ENSOGAP00000004084; ENSOGAG00000004578.

Similar proteinsi

Entry informationi

Entry nameiH0WQ72_OTOGA
AccessioniPrimary (citable) accession number: H0WQ72
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: March 28, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported