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Protein
Submitted name:

Protein O-mannosyltransferase 1

Gene

POMT1

Organism
Cavia porcellus (Guinea pig)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyltransferase 1Imported
Gene namesi
Name:POMT1Imported
OrganismiCavia porcellus (Guinea pig)Imported
Taxonomic identifieri10141 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaCaviidaeCavia
Proteomesi
  • UP000005447 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei68 – 88HelicalSequence analysisAdd BLAST21
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei126 – 146HelicalSequence analysisAdd BLAST21
Transmembranei158 – 174HelicalSequence analysisAdd BLAST17
Transmembranei186 – 203HelicalSequence analysisAdd BLAST18
Transmembranei208 – 226HelicalSequence analysisAdd BLAST19
Transmembranei246 – 267HelicalSequence analysisAdd BLAST22
Transmembranei571 – 594HelicalSequence analysisAdd BLAST24
Transmembranei614 – 634HelicalSequence analysisAdd BLAST21
Transmembranei641 – 663HelicalSequence analysisAdd BLAST23
Transmembranei675 – 694HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSCPOG00000020217.

Interactioni

Protein-protein interaction databases

STRINGi10141.ENSCPOP00000019768.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini296 – 359MIRInterPro annotationAdd BLAST64
Domaini370 – 427MIRInterPro annotationAdd BLAST58
Domaini431 – 491MIRInterPro annotationAdd BLAST61

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3359. Eukaryota.
COG1928. LUCA.
GeneTreeiENSGT00900000141137.
InParanoidiH0W9V8.
OMAiWWIVKDP.
OrthoDBiEOG091G02QX.
TreeFamiTF300552.

Family and domain databases

InterProiView protein in InterPro
IPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
IPR036300. MIR_dom_sf.
IPR016093. MIR_motif.
IPR032421. PMT_4TMC.
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiView protein in Pfam
PF02815. MIR. 1 hit.
PF02366. PMT. 1 hit.
PF16192. PMT_4TMC. 1 hit.
SMARTiView protein in SMART
SM00472. MIR. 3 hits.
SUPFAMiSSF82109. SSF82109. 1 hit.
PROSITEiView protein in PROSITE
PS50919. MIR. 3 hits.

Sequencei

Sequence statusi: Complete.

H0W9V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGFLKRPIV VTAEVNLNMV SLTVASLLSR LWCLSYPRAV VFDEVYYGPF
60 70 80 90 100
ISFYMNRVFF LDDSGPPLGH MLLALGGYLG GFDGNFLWNR IGAEYTKNVP
110 120 130 140 150
VWALRLLPAL AGALSVPMGY QIVSELRFSH CAAIGAALLL LIENALITQS
160 170 180 190 200
RLMQLESLLI FFNFLAVLSY LKFFNVQKHS PFSLRWWFWL MLTGVACACA
210 220 230 240 250
VGTRYMGIFT YLLVLCVAAI HAWHLIGDQT LSNVRVLCHV FARAVALVVL
260 270 280 290 300
PAVLYLLCFY VHLTLLYRSG PHDRIMSSAF QASLEGGLAR ITQGQPLEVA
310 320 330 340 350
FGSQVTLKNV FGKPLPCWLH SHQNTYPIIY ENGRGSSHQQ QVTCYPFKDI
360 370 380 390 400
NNWWVIKDPE RHQLVVSNPP KPVRHGDVVQ LVHGMTTRFL NTHDVAAPLS
410 420 430 440 450
LHAQEVSCYV DYNISMPAQN LWRLDIVNRQ SDRDTWKTIL STVRFVHLNT
460 470 480 490 500
SAVLKLSGAH LPEWGFRQLE VVGEKLSRGQ HESMAWNVEE HHYRTSQEQR
510 520 530 540 550
GQELELHTPM KANFSLNLSF MARFLELQWR MLTLQSEEAE HRYSSTPLDW
560 570 580 590 600
VTLDSNIPYW LNPRSSAQIH LLGNLVIWAS ASMATATYVL LFLWYLLRRQ
610 620 630 640 650
RDIHDLPEDV WQRWVLAGAL CGGGWAVNYL PFFLMEKTLF LYHYLPALAF
660 670 680 690 700
QLLLLPLVLQ HTWDHLCRTQ VQRGVFSALV VTWYSAACHV SNMLRPLTYG
710 720
DRPLSPGELL ALHWRDSWDI LIRKP
Length:725
Mass (Da):82,892
Last modified:November 22, 2017 - v2
Checksum:iB6FBD12E58D40CED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAKN02030150 Genomic DNA. No translation available.
RefSeqiXP_003470977.2. XM_003470929.3.

Genome annotation databases

EnsembliENSCPOT00000026175; ENSCPOP00000019768; ENSCPOG00000020217.
GeneIDi100728528.

Similar proteinsi

Entry informationi

Entry nameiH0W9V8_CAVPO
AccessioniPrimary (citable) accession number: H0W9V8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: November 22, 2017
Last modified: December 20, 2017
This is version 36 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported