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Protein
Submitted name:

Uncharacterized protein

Gene

Srcap

Organism
Cavia porcellus (Guinea pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SrcapImported
OrganismiCavia porcellus (Guinea pig)Imported
Taxonomic identifieri10141 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaCaviidaeCavia
Proteomesi
  • UP000005447 Componenti: Unassembled WGS sequence

Expressioni

Gene expression databases

BgeeiENSCPOG00000010624.

Interactioni

Protein-protein interaction databases

STRINGi10141.ENSCPOP00000009537.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini309 – 474Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1724 – 1877Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili169 – 196Sequence analysisAdd BLAST28
Coiled coili2005 – 2032Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
COG0553. LUCA.
GeneTreeiENSGT00530000063427.
InParanoidiH0VHB0.
OMAiENDGFPA.
OrthoDBiEOG091G045T.
TreeFamiTF106424.

Family and domain databases

InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
PRINTSiPR00929. ATHOOK.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Complete.

H0VHB0-1 [UniParc]FASTAAdd to basket

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        10         20         30         40         50
EGELPLEELL RSLPPQLLGG SSSPSQTTSS HDSDTRDGPE ESVEEEPSQV
60 70 80 90 100
LEVKAPPSSV TQRNKQPWHP DEDDEEFTAN EDEAEDEEDT IAAEEQLEGE
110 120 130 140 150
VDHAMELSEL AREGELSMEE LLQQYAGAYA SDASAPGSGS SEEDEDGEVE
160 170 180 190 200
ANSSECEPDG AAEAEEAPHE DSSSQSDTAE EQSEDEEDEH SAEEETSGSS
210 220 230 240 250
ESEESESDES EGAQSQSQAD EEEEDDFGVE YLLARDEEQS EADGGSGPPT
260 270 280 290 300
PGPTTTLGPK KEITDIAAAA ESLQPKGYTL ATTQVKTPIP LLLRGQLREY
310 320 330 340 350
QHIGLDWLVT MYEKKLNGIL ADEMGLGKTI QTISLLAHLA CEKGNWGPHL
360 370 380 390 400
IIVPTSVMLN WEMELKRWCP SFKILTYYGA QKERKLKRQG WTKPNAFHVC
410 420 430 440 450
ITSYKLVLQD HQAFRRKNWR YLILDEAQNI KNFKSQRWQS LLNFNSQRRL
460 470 480 490 500
LLTGTPLQNS LMELWSLMHF LMPHVFQSHR EFKEWFSNPL TGMIEGSQEY
510 520 530 540 550
NEGLVKRLHK VLRPFLLRRV KVDVEKQMPK KYEHVIRCRL SKRQRYLYDD
560 570 580 590 600
FMAQTTTKET LATGHFMSVI NILMQLRKVC NHPNLFDPRP VTSPFITPGI
610 620 630 640 650
CFSTSSLVLS ATDVHPLQRI DMGRFDLIGL EGRVSRYEAD TFLPRHRLSR
660 670 680 690 700
RVLLEVATAP DPPPRPKPVK MKVNRMLQPV PKQEGRTVVV VNSPRTPLGP
710 720 730 740 750
VPVRPPPGPE LSAQPTPGPT PPVLQAPLMV SASPSGPPLV PVSRPPGPVL
760 770 780 790 800
LPPLQPNSGP LPQVLPSSLG VLSGTSRPPT PTLSLKPAPP APVRLSPAPP
810 820 830 840 850
PGSSSLLKPL TVPPGYTFSP SGSTSTSGTT ASAPTTAVSA PTPAPQRLIL
860 870 880 890 900
SPDMQARLPS GEVVSIGQLA SLAQRPVASA GGSKPLTFQI QGNKLTLTGA
910 920 930 940 950
QVRQLAVGQP RPLQRNVVHL VSAGGQHHLI SQPAHVALIQ AVAPTPGPTP
960 970 980 990 1000
VSVLPSSTPS TTPAPTGLSL PLAANQVPPS MVNNTGVVKI VVRQAPRDGL
1010 1020 1030 1040 1050
TPVPPLAPAP RTPSSGLPAV LTPRPTLTPG RLPTSTLGTA RSPMPTPTLV
1060 1070 1080 1090 1100
RPLLKLVHSS SPEVSASAPG PAPMTISSSL HVPSSLPGPS PPPMPVSNSS
1110 1120 1130 1140 1150
PLASPVSSTV SVPVSSSLSI SVPATPPVPV SAALTIPISA SLPVSASGPA
1160 1170 1180 1190 1200
LLASVTPALA PVVSAAPGQP SLVPAGASPS ASALTLGLAT APALSPSQTP
1210 1220 1230 1240 1250
GHPLLLAPTS SHVPGLNSAV APACSPVLVP ASALASPFPA APNPTPAQAS
1260 1270 1280 1290 1300
ILASAPSASQ ALATSLAPMV APQTAILSPS APPLAPLPVL APSPGPASVL
1310 1320 1330 1340 1350
APSQTPVPVM APSVTPGSPL ASSSLVPAPT PVLATSSTQT MVSCPIPSPL
1360 1370 1380 1390 1400
SSLASTQTLA LTPALASTLG GSSPSHTHSL GTGNPQGSFP TQTLSLTPSS
1410 1420 1430 1440 1450
SLVPTPGQTL SLASGAPLGP TQTLSLAPAP SLAPASPMGP ASAHTLTLAP
1460 1470 1480 1490 1500
ASSSASLLAP ASVHTLTLSP APVPLPTLGP SAPQTLALAP ASTQAPASQA
1510 1520 1530 1540 1550
SSLVVSASGT ASLPVTMVNR QSVPKDEPET LTLRSGPPSP PSTATSFSGS
1560 1570 1580 1590 1600
RPRRQPPPPP RSPFYLDSLE EKRKRQRSER LERIFQLSEA HGALAPMYGT
1610 1620 1630 1640 1650
EVLDFCTLPQ PVASPISPHC PGPSHPTFWT YTEAAQRAVL LPQQRLDQLS
1660 1670 1680 1690 1700
DIIERFIFVM PPVEAPPPSL HACHPPPWLA PRQAAFQEQL ACELWPRARP
1710 1720 1730 1740 1750
LHRIVCNMRT QFPDLRLIQY DCGKLQTLAV LLRQLKAEGH RVLIFTQMTR
1760 1770 1780 1790 1800
MLDVLEQFLT YHGHLYLRLD GSTRVEQRQA LMERFNADKR IFCFILSTRS
1810 1820 1830 1840 1850
GGVGVNLTGA DTVVFYDSDW NPTMDAQAQD RCHRIGQTRD VHIYRLISER
1860 1870 1880 1890 1900
TVEENILKKA NQKRMLGDMA IEGGNFTTAY FKQQTIRELF DMPLEEPSGS
1910 1920 1930 1940 1950
SAPSAPEEEE ETVANKQTLI LEQALCRAED EEDIRAATQA KAEQVAELAE
1960 1970 1980 1990 2000
FNENDGFTVG EGEEASRVGA DDEEMSRAEQ EIAALVEQLT PIERYAMKFL
2010 2020 2030 2040 2050
EASLEEVSRE ELKQAEEQVE AARKDLDQAK EEVFRLPQEQ EEGPGAGDEI
2060 2070 2080 2090 2100
SCGTSGGSHR RNKKVKAPER LGTRVSERLR GARTETQGTN HTPVTSTHHI
2110 2120 2130 2140 2150
RSTSTPPRCS PAKERVARPA SRPRPTQASA PTVVPAPIPV SIPFSAPNPV
2160 2170 2180 2190 2200
TVLPVHISPS PPPPLQIAPS SACTPPAACS PPPPPHTPPP AQTSLLTPAS
2210 2220 2230 2240 2250
PLLLDSPSVP ISSPVTNLSL GLGPEAELCA QALASTEPLE MAGMTSSEIS
2260 2270 2280 2290 2300
PLPLMSPKDL LPVALEVLPV LEKNLPLISS APSPTPEAGS IPNGQEQEVR
2310 2320 2330 2340 2350
DLAEGTITEL DHEQLPTGLS ESNGLELPPS LPSDEPLQEA DRTLEELVEV
2360 2370 2380 2390 2400
QTPTSSPEKS QELATAEITA PSTSSSVTSS PEGPSPVRPP RRRTSADVEI
2410 2420 2430 2440 2450
RGQGTGRPGQ PPGPKVLRKL PGRLVTVVEE KELVRRRRQQ RGTASTLVPG
2460 2470 2480 2490 2500
ASEISASPGS PSTRSMSGPE SSPPNSGPGE AVPSSSLPTA IQPFIARRHI
2510 2520 2530 2540 2550
ELGVAERDSP ENGEGALLAI SPPAVKRRRG RPPKKNRSPA DVGRGVDEAF
2560 2570 2580 2590 2600
SSISKGKTNG TDPVPGAETL IVVDPVLQPQ LIPESQPPGP PPAHQPEPII
2610 2620 2630 2640 2650
LSPVEKRRRG RPPKARDLSI PGTISSAGDG SLESRTQQLP QPPPPPPPLL
2660 2670 2680 2690 2700
TCPTAPVANT VTTVTISMSP PKRKRGRPPK NPPSPRASQL PVLDRDSSSV
2710 2720 2730 2740 2750
LESCGLGRRR LPQGQGESEG SSSDEDGSRP LTRLARLRLE AEGVRGRKNE
2760 2770 2780 2790 2800
GSMVVAVIQD DLDVADSGPG GLELTPPVVS LAPKLRSTRL RPGSLVPPLE
2810 2820 2830 2840 2850
TEKVPRKRAG APVGGGPGLA KRGRAQPPSP LEPEGSVEES EAEASGEEEE
2860 2870 2880 2890
GDGTLRRRPG PRRLVGTTNQ GDQRILRSSA PPLLSGPAIS HRGRKAKT
Length:2,898
Mass (Da):307,219
Last modified:February 22, 2012 - v1
Checksum:iDFB47F30300A49C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAKN02007779 Genomic DNA. No translation available.
AAKN02007780 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSCPOT00000010721; ENSCPOP00000009537; ENSCPOG00000010624.

Similar proteinsi

Entry informationi

Entry nameiH0VHB0_CAVPO
AccessioniPrimary (citable) accession number: H0VHB0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: August 30, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported