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Protein
Submitted name:

Uncharacterized protein

Gene

Srcap

Organism
Cavia porcellus (Guinea pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SrcapImported
OrganismiCavia porcellus (Guinea pig)Imported
Taxonomic identifieri10141 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricomorphaCaviidaeCavia
Proteomesi
  • UP000005447 Componenti: Unassembled WGS sequence

Expressioni

Gene expression databases

BgeeiENSCPOG00000010624.

Interactioni

Protein-protein interaction databases

STRINGi10141.ENSCPOP00000009537.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 196HSAInterPro annotationAdd BLAST73
Domaini594 – 759Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1997 – 2150Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili96 – 116Sequence analysisAdd BLAST21
Coiled coili170 – 190Sequence analysisAdd BLAST21
Coiled coili454 – 481Sequence analysisAdd BLAST28
Coiled coili2207 – 2227Sequence analysisAdd BLAST21
Coiled coili2241 – 2261Sequence analysisAdd BLAST21
Coiled coili2278 – 2305Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
COG0553. LUCA.
GeneTreeiENSGT00530000063427.
InParanoidiH0VHB0.
OMAiENDGFPA.
OrthoDBiEOG091G045T.
TreeFamiTF106424.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
PRINTSiPR00929. ATHOOK.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.

Sequencei

Sequence statusi: Complete.

H0VHB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSSPSPAHP QLSILQTQMV SDGMTGSNPV SPASSSSPAS SGAGGISPQH
60 70 80 90 100
IAQDSSLDGP PGPPDGATVP LEGVSLIHSG DLANKGPKWE KSHAEIAEQA
110 120 130 140 150
KHEAEIETRI AELRKEGFWS LKRLPKVPEP PRPKGHWDYL CEEMQWLSAD
160 170 180 190 200
FAQERRWKRG VARKVVRMVI RHHEEQRQKE ERARREEQAK LRRIASTMAK
210 220 230 240 250
DVRQFWSNVE KVVQFKQQSR LEEKRKKALD LHLDFIVGQT EKYSDLLSQS
260 270 280 290 300
LNQPLASSKA GSSPCLGSSS AASSPVPPAS RLDEEGGELP LEELLRSLPP
310 320 330 340 350
QLLGGSSSPS QTTSSHDSDT RDGPEESVEE EPSQVLEVKA PPSSVTQRNK
360 370 380 390 400
QPWHPDEDDE EFTANEDEAE DEEDTIAAEE QLEGEVDHAM ELSELAREGE
410 420 430 440 450
LSMEELLQQY AGAYASDASA PGSGSSEEDE DGEVEANSSE CEPDGAAEAE
460 470 480 490 500
EAPHEDSSSQ SDTAEEQSED EEDEHSAEEE TSGSSESEES ESDESEGAQS
510 520 530 540 550
QSQADEEEED DFGVEYLLAR DEEQSEADGG SGPPTPGPTT TLGPKKEITD
560 570 580 590 600
IAAAAESLQP KGYTLATTQV KTPIPLLLRG QLREYQHIGL DWLVTMYEKK
610 620 630 640 650
LNGILADEMG LGKTIQTISL LAHLACEKGN WGPHLIIVPT SVMLNWEMEL
660 670 680 690 700
KRWCPSFKIL TYYGAQKERK LKRQGWTKPN AFHVCITSYK LVLQDHQAFR
710 720 730 740 750
RKNWRYLILD EAQNIKNFKS QRWQSLLNFN SQRRLLLTGT PLQNSLMELW
760 770 780 790 800
SLMHFLMPHV FQSHREFKEW FSNPLTGMIE GSQEYNEGLV KRLHKVLRPF
810 820 830 840 850
LLRRVKVDVE KQMPKKYEHV IRCRLSKRQR YLYDDFMAQT TTKETLATGH
860 870 880 890 900
FMSVINILMQ LRKVCNHPNL FDPRPVTSPF ITPGICFSTS SLVLSATDVH
910 920 930 940 950
PLQRIDMGRF DLIGLEGRVS RYEADTFLPR HRLSRRVLLE VATAPDPPPR
960 970 980 990 1000
PKPVKMKVNR MLQPVPKQEG RTVVVVNSPR TPLGPVPVRP PPGPELSAQP
1010 1020 1030 1040 1050
TPGPTPPVLQ APLMVSASPS GPPLVPVSRP PGPVLLPPLQ PNSGPLPQVL
1060 1070 1080 1090 1100
PSSLGVLSGT SRPPTPTLSL KPAPPAPVRL SPAPPPGSSS LLKPLTVPPG
1110 1120 1130 1140 1150
YTFSPSGSTS TSGTTASAPT TAVSAPTPAP QRLILSPDMQ ARLPSGEVVS
1160 1170 1180 1190 1200
IGQLASLAQR PVASAGGSKP LTFQIQGNKL TLTGAQVRQL AVGQPRPLQR
1210 1220 1230 1240 1250
NVVHLVSAGG QHHLISQPAH VALIQAVAPT PGPTPVSVLP SSTPSTTPAP
1260 1270 1280 1290 1300
TGLSLPLAAN QVPPSMVNNT GVVKIVVRQA PRDGLTPVPP LAPAPRTPSS
1310 1320 1330 1340 1350
GLPAVLTPRP TLTPGRLPTS TLGTARSPMP TPTLVRPLLK LVHSSSPEVS
1360 1370 1380 1390 1400
ASAPGPAPMT ISSSLHVPSS LPGPSPPPMP VSNSSPLASP VSSTVSVPVS
1410 1420 1430 1440 1450
SSLSISVPAT PPVPVSAALT IPISASLPVS ASGPALLASV TPALAPVVSA
1460 1470 1480 1490 1500
APGQPSLVPA GASPSASALT LGLATAPALS PSQTPGHPLL LAPTSSHVPG
1510 1520 1530 1540 1550
LNSAVAPACS PVLVPASALA SPFPAAPNPT PAQASILASA PSASQALATS
1560 1570 1580 1590 1600
LAPMVAPQTA ILSPSAPPLA PLPVLAPSPV PVMAPSVTPG SPLASSSLVP
1610 1620 1630 1640 1650
APTPVLATSS TQTMVSCPIP SPLSSLASTQ TLALTPALAS TLGGSSPSHT
1660 1670 1680 1690 1700
HSLGTGNPQG SFPTQTLSLT PSSSLVPTPG QTLSLASGAP LGPTQTLSLA
1710 1720 1730 1740 1750
PAPSLAPASP MGPASAHTLT LAPASSSASL LAPASVHTLT LSPAPVPLPT
1760 1770 1780 1790 1800
LGPSAPQTLA LAPASTQAPA SQASSLVVSA SGTASLPVTM VNRQSVPKDE
1810 1820 1830 1840 1850
PETLTLRSGP PSPPSTATSF SGSRPRRQPP PPPRSPFYLD SLEEKRKRQR
1860 1870 1880 1890 1900
SERLERIFQL SEAHGALAPM YGTEVLDFCT LPQPVASPIS PHCPGPSHPT
1910 1920 1930 1940 1950
FWTYTEAAQR AVLLPQQRLD QLSDIIERFI FVMPPVEAPP PSLHACHPPP
1960 1970 1980 1990 2000
WLAPRQAAFQ EQLACELWPR ARPLHRIVCN MRTQFPDLRL IQYDCGKLQT
2010 2020 2030 2040 2050
LAVLLRQLKA EGHRVLIFTQ MTRMLDVLEQ FLTYHGHLYL RLDGSTRVEQ
2060 2070 2080 2090 2100
RQALMERFNA DKRIFCFILS TRSGGVGVNL TGADTVVFYD SDWNPTMDAQ
2110 2120 2130 2140 2150
AQDRCHRIGQ TRDVHIYRLI SERTVEENIL KKANQKRMLG DMAIEGGNFT
2160 2170 2180 2190 2200
TAYFKQQTIR ELFDMPLEEP SGSSAPSAPE EEEETVANKQ TLILEQALCR
2210 2220 2230 2240 2250
AEDEEDIRAA TQAKAEQVAE LAEFNENDGF TVGEGEEASR VGADDEEMSR
2260 2270 2280 2290 2300
AEQEIAALVE QLTPIERYAM KFLEASLEEV SREELKQAEE QVEAARKDLD
2310 2320 2330 2340 2350
QAKEEVFRLP QEQEEGPGAG DEISCGTSGG SHRRNKKVKA PERLGTRVSE
2360 2370 2380 2390 2400
RLRGARTETQ GTNHTPVTST HHIRSTSTPP RCSPAKERVA RPASRPRPTQ
2410 2420 2430 2440 2450
ASAPTVVPAP IPVSIPFSAP NPVTVLPVHI SPSPPPPLQI APSSACTPPA
2460 2470 2480 2490 2500
ACSPPPPPHT PPPAQTSLLT PASPLLLDSP SVPISSPVTN LSLGLGPEAE
2510 2520 2530 2540 2550
LCAQALASTE PLEMAGMTSS EISPLPLMSP KDLLPVALEV LPVLEKNLPL
2560 2570 2580 2590 2600
ISSAPSPTPE AGSIPNGQEQ EVRDLAEGTI TELDHEQLPT GLSESNGLEL
2610 2620 2630 2640 2650
PPSLPSDEPL QEADRTLEEL VEVQTPTSSP EKSQELATAE ITAPSTSSSV
2660 2670 2680 2690 2700
TSSPEGPSPV RPPRRRTSAD VEIRGQGTGR PGQPPGPKVL RKLPGRLVTV
2710 2720 2730 2740 2750
VEEKELVRRR RQQRGTASTL VPGASEISAS PGSPSTRSMS GPESSPPNSG
2760 2770 2780 2790 2800
PGEAVPSSSL PTAIQPFIAR RHIELGVAER DSPENGEGAL LAISPPAVKR
2810 2820 2830 2840 2850
RRGRPPKKNR SPADVGRGVD EAFSSISKGK TNGTDPVPGA ETLIVVDPVL
2860 2870 2880 2890 2900
QPQLIPESQP PGPPPAHQPE PIILSPVEKR RRGRPPKARD LSIPGTISSA
2910 2920 2930 2940 2950
GDGSLESRTQ QLPQPPPPPP PLLTCPTAPV ANTVTTVTIS MSPPKRKRGR
2960 2970 2980 2990 3000
PPKNPPSPRA SQLPVLDRDS SSVLESCGLG RRRLPQGQGE SEGSSSDEDG
3010 3020 3030 3040 3050
SRPLTRLARL RLEAEGVRGR KNEGSMVVAV IQDDLDVADS GPGGLELTPP
3060 3070 3080 3090 3100
VVSLAPKLRS TRLRPGSLVP PLETEKVPRK RAGAPVGGGP GLAKRGRAQP
3110 3120 3130 3140 3150
PSPLEPEGSV EESEAEASGE EEEGDGTLRR RPGPRRLVGT TNQGDQRILR
3160 3170
SSAPPLLSGP AISHRGRKAK T
Length:3,171
Mass (Da):337,552
Last modified:November 22, 2017 - v2
Checksum:iE490E2DA0273F1A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAKN02007778 Genomic DNA. No translation available.
AAKN02007779 Genomic DNA. No translation available.
AAKN02007780 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSCPOT00000010721; ENSCPOP00000009537; ENSCPOG00000010624.

Similar proteinsi

Entry informationi

Entry nameiH0VHB0_CAVPO
AccessioniPrimary (citable) accession number: H0VHB0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: November 22, 2017
Last modified: December 20, 2017
This is version 32 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported