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Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Gordonia effusa NBRC 100432
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandCopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
ORF Names:GOEFS_036_00300Imported
OrganismiGordonia effusa NBRC 100432Imported
Taxonomic identifieri1077974 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesGordoniaceaeGordonia
Proteomesi
  • UP000035034 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500353690136 – 226Superoxide dismutase [Cu-Zn]Sequence analysisAdd BLAST191

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 222Sod_CuInterPro annotationAdd BLAST140

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiView protein in InterPro
IPR036423. SOD-like_Cu/Zn_dom_sf.
IPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiView protein in Pfam
PF00080. Sod_Cu. 1 hit.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiView protein in PROSITE
PS00332. SOD_CU_ZN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H0QXP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSRSATSNT RTARTWARAV AAVGATGVVA VGLVACSNGE EPTDVPGTTP
60 70 80 90 100
SVITGDQAPP GEVTVPGGSS EKVGAVAKLV DAKNNEVGTA IFTPEGAAVK
110 120 130 140 150
VTVEVTKGVA AGFHGLHLHS NGVCDPSTTE PFSSAGGHLQ VDGHTGHPSS
160 170 180 190 200
GDLVSLNVLK NGTGTTITTT DAVTLSQIVG KSIVIHEKPD NFGNIPTRYA
210 220
PSPDQTTMKT GDAGPRLACG VITAKE
Length:226
Mass (Da):22,688
Last modified:February 22, 2012 - v1
Checksum:i6FDDF19ECF6DFB85
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAEH01000036 Genomic DNA. Translation: GAB17591.1.
RefSeqiWP_007316929.1. NZ_BAEH01000036.1.

Genome annotation databases

EnsemblBacteriaiGAB17591; GAB17591; GOEFS_036_00300.

Similar proteinsi

Entry informationi

Entry nameiH0QXP0_9ACTN
AccessioniPrimary (citable) accession number: H0QXP0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 25, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported