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H0QDY4

- H0QDY4_ECOLI

UniProt

H0QDY4 - H0QDY4_ECOLI

Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Escherichia coli str. K-12 substr. MDS42
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Name:malSImported
    ORF Names:ECMDS42_3008Imported
    OrganismiEscherichia coli str. K-12 substr. MDS42Imported
    Taxonomic identifieri1110693 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000005626: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliH0QDY4.
    SMRiH0QDY4. Positions 181-670.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.
    OMAiGQNWHSF.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    H0QDY4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
    LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQIDTRSGT 100
    PTLMISIQNA AEPVASLVRE CPKWDGLPLT VDVSATFPEG AAVRDYYSQQ 150
    IAIVKNGQIM LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE 200
    NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
    PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
    HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KSLGERWSDW 350
    KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
    LAFLPDIKTE STTASGLPVF YKNKMDTHAK AIDGYTPRDY LTHWLSQWVR 450
    DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
    TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
    KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
    PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT 650
    LLLKQGYGFV REHGDDKVLV VWAGQQ 676
    Length:676
    Mass (Da):75,713
    Last modified:February 22, 2012 - v1
    Checksum:i980110EFA45E011D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012306 Genomic DNA. Translation: BAL40168.1.
    RefSeqiYP_007558561.1. NC_020518.1.

    Genome annotation databases

    EnsemblBacteriaiBAL40168; BAL40168; ECMDS42_3008.
    GeneIDi14970073.
    KEGGiecok:ECMDS42_3008.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012306 Genomic DNA. Translation: BAL40168.1 .
    RefSeqi YP_007558561.1. NC_020518.1.

    3D structure databases

    ProteinModelPortali H0QDY4.
    SMRi H0QDY4. Positions 181-670.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL40168 ; BAL40168 ; ECMDS42_3008 .
    GeneIDi 14970073.
    KEGGi ecok:ECMDS42_3008.

    Phylogenomic databases

    KOi K01176.
    OMAi GQNWHSF.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "genome sequence of Escherichia coli str. K-12 substr. MDS42."
      Ying B.W., Seno S., Suzuki S., Yomo T.
      Submitted (NOV-2100) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: K-12Imported.

    Entry informationi

    Entry nameiH0QDY4_ECOLI
    AccessioniPrimary (citable) accession number: H0QDY4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3