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H0QDY4

- H0QDY4_ECOLI

UniProt

H0QDY4 - H0QDY4_ECOLI

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Protein
Submitted name: Alpha-amylase
Gene
malS, ECMDS42_3008
Organism
Escherichia coli str. K-12 substr. MDS42
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:ECMDS42_3008Imported
OrganismiEscherichia coli str. K-12 substr. MDS42Imported
Taxonomic identifieri1110693 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000005626: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliH0QDY4.
SMRiH0QDY4. Positions 181-670.

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiGQNWHSF.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

H0QDY4-1 [UniParc]FASTAAdd to Basket

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MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQIDTRSGT 100
PTLMISIQNA AEPVASLVRE CPKWDGLPLT VDVSATFPEG AAVRDYYSQQ 150
IAIVKNGQIM LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KSLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKMDTHAK AIDGYTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT 650
LLLKQGYGFV REHGDDKVLV VWAGQQ 676
Length:676
Mass (Da):75,713
Last modified:February 22, 2012 - v1
Checksum:i980110EFA45E011D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012306 Genomic DNA. Translation: BAL40168.1.
RefSeqiYP_007558561.1. NC_020518.1.

Genome annotation databases

EnsemblBacteriaiBAL40168; BAL40168; ECMDS42_3008.
GeneIDi14970073.
KEGGiecok:ECMDS42_3008.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012306 Genomic DNA. Translation: BAL40168.1 .
RefSeqi YP_007558561.1. NC_020518.1.

3D structure databases

ProteinModelPortali H0QDY4.
SMRi H0QDY4. Positions 181-670.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL40168 ; BAL40168 ; ECMDS42_3008 .
GeneIDi 14970073.
KEGGi ecok:ECMDS42_3008.

Phylogenomic databases

KOi K01176.
OMAi GQNWHSF.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "genome sequence of Escherichia coli str. K-12 substr. MDS42."
    Ying B.W., Seno S., Suzuki S., Yomo T.
    Submitted (NOV-2100) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K-12Imported.

Entry informationi

Entry nameiH0QDY4_ECOLI
AccessioniPrimary (citable) accession number: H0QDY4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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