Skip Header

Contribute Send feedback
Read comments (?) or add your own

H0PMT7 (H0PMT7_9SYNC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL BAL35536.1
ORF Names:SYNPCCP_1450 EMBL BAL35536.1
OrganismSynechocystis sp. PCC 6803 substr. PCC-P EMBL BAL35536.1
Taxonomic identifier1080230 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis ›

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H0PMT7 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: C0CBE22553AC085E

FASTA19921,677
        10         20         30         40         50         60 
MAYALPNLPY DYTALEPCIS KSTLEFHHDK HHAAYVNNFN NAVAGTDLDN QSIEDVIKAV 

        70         80         90        100        110        120 
AGDASKAGIF NNAAQAWNHS FYWNCMKPGG GGQPSGALAD KINADFGSFD AFVEAFKQAG 

       130        140        150        160        170        180 
ATQFGSGWAW LVLDNGTLKV TKTGNAENPM TAGQTPLLTM DVWEHAYYLD YQNRRPDYIA 

       190 
DFLGKLVNWD FVAANLAAA

« Hide

References

[1]"Identification of substrain-specific mutations by massively parallel whole-genome resequencing of Synechocystis sp. PCC 6803."
Kanesaki Y., Shiwa Y., Tajima N., Suzuki M., Watanabe S., Sato N., Ikeuchi M., Yoshikawa H.
DNA Res. 19:67-79(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012278 Genomic DNA. Translation: BAL35536.1.
RefSeqYP_005386382.1. NC_017039.1.

3D structure databases

ProteinModelPortalH0PMT7.
SMRH0PMT7. Positions 2-198.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL35536; BAL35536; SYNPCCP_1450.
GeneID11978881.
KEGGsyq:SYNPCCP_1450.

Phylogenomic databases

KOK04564.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH0PMT7_9SYNC
AccessionPrimary (citable) accession number: H0PMT7
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: May 1, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info