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H0PED1 (H0PED1_9SYNC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:nadB EMBL BAL33880.1
ORF Names:SYNPCCN_2963 EMBL BAL33880.1
OrganismSynechocystis sp. PCC 6803 substr. PCC-N [Complete proteome] EMBL BAL33880.1
Taxonomic identifier1080229 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processNAD biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionL-aspartate oxidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H0PED1 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 0ABCE7366B9940CC

FASTA55360,498
        10         20         30         40         50         60 
MGANQFDVVV VGSGAAGLYA CLCLPGHYRV ALVTKAELKT GASDWAQGGI AAAIAPTDSP 

        70         80         90        100        110        120 
QSHYEDTLAA GAGLCDGEAV DFLVNHAPQA IAELVQFGVS FDRHGQHLAL TLEAAHSQPR 

       130        140        150        160        170        180 
VLHAADTTGR AIVSTLMGQV QARPNVEIFS QAIALSLNIE PTTGHCRGIQ VFVNQTIETF 

       190        200        210        220        230        240 
HSRAVLLATG GGGQVFAQTT NPKVSTGDGI ALAWRSGAQV RDLEFFQFHP TALTKPGVPH 

       250        260        270        280        290        300 
FLISEAVRGE GAHLLDRQGK RFAFDYHPRG ELAPRDVVSR AIFQHLANTE KDPTQATVFL 

       310        320        330        340        350        360 
DLSPIEPERI QRRFPNIIRR CLHWGVDIFR EPIPVAPAAH YWMGGITTDI NCQTTIPGLY 

       370        380        390        400        410        420 
ALGETASTGV HGANRLASNS LLECIVFASQ LRNLSLPPLA SSDSNVNQSI KEIRLDTTND 

       430        440        450        460        470        480 
LALLNHWRSE LPRLMWQTAG ICRQAETLQM AIAKLEQWQE QWQQLSSSKL LAHLPEDQKI 

       490        500        510        520        530        540 
SLSGPGLNEF MQLWAETHNL LDIAQLILTS ALFREESRGG HYRLDCPDTK REWQSHTVIE 

       550 
GTRVFLQPSQ SQD 

« Hide

References

[1]"Identification of substrain-specific mutations by massively parallel whole-genome resequencing of Synechocystis sp. PCC 6803."
Kanesaki Y., Shiwa Y., Tajima N., Suzuki M., Watanabe S., Sato N., Ikeuchi M., Yoshikawa H.
DNA Res. 19:67-79(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012277 Genomic DNA. Translation: BAL33880.1.
RefSeqYP_005410602.1. NC_017052.1.

3D structure databases

ProteinModelPortalH0PED1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL33880; BAL33880; SYNPCCN_2963.
GeneID12011122.
KEGGsys:SYNPCCN_2963.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00278.

Enzyme and pathway databases

BioCycSSP1080229:GLM2-3005-MONOMER.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR005288. NadB.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
PRINTSPR00368. FADPNR.
SUPFAMSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsTIGR00551. nadB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH0PED1_9SYNC
AccessionPrimary (citable) accession number: H0PED1
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 22, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)