Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

H0P8T5 (H0P8T5_9SYNC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL BAL32367.1
ORF Names:SYNPCCN_1450 EMBL BAL32367.1
OrganismSynechocystis sp. PCC 6803 substr. PCC-N [Complete proteome] EMBL BAL32367.1
Taxonomic identifier1080229 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H0P8T5 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: C0CBE22553AC085E

FASTA19921,677
        10         20         30         40         50         60 
MAYALPNLPY DYTALEPCIS KSTLEFHHDK HHAAYVNNFN NAVAGTDLDN QSIEDVIKAV 

        70         80         90        100        110        120 
AGDASKAGIF NNAAQAWNHS FYWNCMKPGG GGQPSGALAD KINADFGSFD AFVEAFKQAG 

       130        140        150        160        170        180 
ATQFGSGWAW LVLDNGTLKV TKTGNAENPM TAGQTPLLTM DVWEHAYYLD YQNRRPDYIA 

       190 
DFLGKLVNWD FVAANLAAA 

« Hide

References

[1]"Identification of substrain-specific mutations by massively parallel whole-genome resequencing of Synechocystis sp. PCC 6803."
Kanesaki Y., Shiwa Y., Tajima N., Suzuki M., Watanabe S., Sato N., Ikeuchi M., Yoshikawa H.
DNA Res. 19:67-79(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012277 Genomic DNA. Translation: BAL32367.1.
RefSeqYP_005409089.1. NC_017052.1.

3D structure databases

ProteinModelPortalH0P8T5.
SMRH0P8T5. Positions 2-198.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL32367; BAL32367; SYNPCCN_1450.
GeneID12011779.
KEGGsys:SYNPCCN_1450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04564.

Enzyme and pathway databases

BioCycSSP1080229:GLM2-1465-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH0P8T5_9SYNC
AccessionPrimary (citable) accession number: H0P8T5
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)