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H0P8T5

- H0P8T5_9SYNC

UniProt

H0P8T5 - H0P8T5_9SYNC

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Protein

Superoxide dismutase

Gene

sodB

Organism
Synechocystis sp. PCC 6803 substr. PCC-N
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciSSP1080229:GLM2-1465-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
ORF Names:SYNPCCN_1450Imported
OrganismiSynechocystis sp. PCC 6803 substr. PCC-NImported
Taxonomic identifieri1080229 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000007108: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH0P8T5.
SMRiH0P8T5. Positions 2-198.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H0P8T5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYALPNLPY DYTALEPCIS KSTLEFHHDK HHAAYVNNFN NAVAGTDLDN
60 70 80 90 100
QSIEDVIKAV AGDASKAGIF NNAAQAWNHS FYWNCMKPGG GGQPSGALAD
110 120 130 140 150
KINADFGSFD AFVEAFKQAG ATQFGSGWAW LVLDNGTLKV TKTGNAENPM
160 170 180 190
TAGQTPLLTM DVWEHAYYLD YQNRRPDYIA DFLGKLVNWD FVAANLAAA
Length:199
Mass (Da):21,677
Last modified:February 22, 2012 - v1
Checksum:iC0CBE22553AC085E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012277 Genomic DNA. Translation: BAL32367.1.
RefSeqiWP_010872652.1. NC_017052.1.
YP_005409089.1. NC_017052.1.

Genome annotation databases

EnsemblBacteriaiBAL32367; BAL32367; SYNPCCN_1450.
GeneIDi12011779.
KEGGisys:SYNPCCN_1450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012277 Genomic DNA. Translation: BAL32367.1 .
RefSeqi WP_010872652.1. NC_017052.1.
YP_005409089.1. NC_017052.1.

3D structure databases

ProteinModelPortali H0P8T5.
SMRi H0P8T5. Positions 2-198.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL32367 ; BAL32367 ; SYNPCCN_1450 .
GeneIDi 12011779.
KEGGi sys:SYNPCCN_1450.

Phylogenomic databases

KOi K04564.

Enzyme and pathway databases

BioCyci SSP1080229:GLM2-1465-MONOMER.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Identification of substrain-specific mutations by massively parallel whole-genome resequencing of Synechocystis sp. PCC 6803."
    Kanesaki Y., Shiwa Y., Tajima N., Suzuki M., Watanabe S., Sato N., Ikeuchi M., Yoshikawa H.
    DNA Res. 19:67-79(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiH0P8T5_9SYNC
AccessioniPrimary (citable) accession number: H0P8T5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3