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G9DRZ1

- G9DRZ1_9LILI

UniProt

G9DRZ1 - G9DRZ1_9LILI

Protein
Submitted name:

Maturase K

Gene

matK

Organism
Alpinia nigra
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. mRNA processing Source: UniProtKB-KW
    2. tRNA processing Source: UniProtKB-KW

    Keywords - Biological processi

    mRNA processingSAAS annotation, tRNA processingSAAS annotation

    Keywords - Ligandi

    RNA-bindingSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Maturase KImported
    Gene namesi
    Name:matKImported
    Encoded oniPlastid; ChloroplastImported
    OrganismiAlpinia nigraImported
    Taxonomic identifieri105678 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaZingiberalesZingiberaceaeAlpinia

    Subcellular locationi

    Plastidchloroplast SAAS annotation

    GO - Cellular componenti

    1. chloroplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    ChloroplastUniRule annotationSAAS annotationImported, Plastid

    Family & Domainsi

    Family and domain databases

    InterProiIPR024937. Domain_X.
    IPR024942. Maturase_MatK_N.
    [Graphical view]
    PfamiPF01348. Intron_maturas2. 1 hit.
    PF01824. MatK_N. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    G9DRZ1-1 [UniParc]FASTAAdd to Basket

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    VLSLHLLQFL LHEYYNWNSL IIPNKSIYIF SKDNKRLFCF LYNLYIYEYE    50
    FLLVFPCKQS SFLRLISSGV LLERIHFYVK IERLGVCRIF CQKTLWIFKD 100
    PFIHYIRYQG KSILGSRGTH FLMKKWKYHL VHFWQYYFHF WSQPYRIDIN 150
    KLSNYSFYFL GYFSSVQMNS SMVRNQMLDN SFLIDTPTKK FDTRIPIIPL 200
    IRSLSKAQFC TVYGYPISKP IWTDLADCDI INRFGRICRK LSHY 244
    Length:244
    Mass (Da):29,672
    Last modified:February 22, 2012 - v1
    Checksum:i536C5A6D090BE66D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei244 – 2441Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JF953115 Genomic DNA. Translation: AEQ45749.1.
    JF953116 Genomic DNA. Translation: AEQ45750.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JF953115 Genomic DNA. Translation: AEQ45749.1 .
    JF953116 Genomic DNA. Translation: AEQ45750.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR024937. Domain_X.
    IPR024942. Maturase_MatK_N.
    [Graphical view ]
    Pfami PF01348. Intron_maturas2. 1 hit.
    PF01824. MatK_N. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants."
      China Plant BOL Group
      Li D.Z., Gao L.M., Li H.T., Wang H., Ge X.J., Liu J.Q., Chen Z.D., Zhou S.L., Chen S.L., Yang J.B., Fu C.X., Zeng C.X., Yan H.F., Zhu Y.J., Sun Y.S., Chen S.Y., Zhao L., Wang K., Yang T., Duan G.W.
      Proc. Natl. Acad. Sci. U.S.A. 108:19641-19646(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. Li D.-Z., Gao L.-M., Li H.-T., Wang H., Ge X.-J.
      Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiG9DRZ1_9LILI
    AccessioniPrimary (citable) accession number: G9DRZ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)